RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 DYSFO75923 2080 aa15.52■□□□□ 0.07
RFFL-211ENST00000584541 IGHV3-64DA0A0J9YX35 117 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 TRIM64BA6NI03 449 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 CDRT1O95170 752 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 PTBP3O95758 552 aaKnown RBP15.51■□□□□ 0.07
RFFL-211ENST00000584541 CYB5AP00167 134 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 SDC2P34741 201 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 RANBP1P43487 201 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 GATA4P43694 442 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 SERPINB10P48595 397 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 ZNF154Q13106 437 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 FAM76BQ5HYJ3 339 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 PRAMEF6Q5VXH4 476 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 WDR86Q86TI4 376 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 ISOC1Q96CN7 298 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 SPACA5Q96QH8 159 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 METTL17Q9H7H0 456 aaPredicted RBP15.51■□□□□ 0.07
RFFL-211ENST00000584541 UFSP2Q9NUQ7 469 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 PPP1R3CQ9UQK1 317 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 PLEKHA6Q9Y2H5 1048 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 POLDIP2Q9Y2S7 368 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 V9GY05 133 aa15.51■□□□□ 0.07
RFFL-211ENST00000584541 DPPA5A6NC42 116 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 SLC22A1O15245 554 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 NCR1O76036 304 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 IRF2P14316 349 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 ADRA2CP18825 462 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 POU3F4P49335 361 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 EFNA4P52798 201 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 MXD1Q05195 221 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 HAGHLQ6PII5 290 aaPredicted RBP15.5■□□□□ 0.07
RFFL-211ENST00000584541 USP43Q70EL4 1123 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 MOGAT3Q86VF5 341 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 SCCPDHQ8NBX0 429 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 OR11L1Q8NGX0 322 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 ZNF671Q8TAW3 534 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 HPS1Q92902 700 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 RFT1Q96AA3 541 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 UQCC2Q9BRT2 126 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 PKIBQ9C010 78 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 BATF3Q9NR55 127 aa15.5■□□□□ 0.07
RFFL-211ENST00000584541 RSL24D1Q9UHA3 163 aaKnown RBP15.5■□□□□ 0.07
RFFL-211ENST00000584541 IGKV1-27A0A075B6S5 117 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 IGHV1-69-2A0A0G2JMI3 117 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 hCG_1807616A0A1W2PRN6 198 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 SHISA3A0PJX4 238 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 LRRC30A6NM36 301 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 J3QT63 122 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 IFNL4K9M1U5 179 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 CDIPTO14735 213 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 F12P00748 615 aaPredicted RBP15.49■□□□□ 0.07
RFFL-211ENST00000584541 PLATP00750 562 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 IL1AP01583 271 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 HPXP02790 462 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 TGFBR1P36897 503 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 MPPED2Q15777 294 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 SPRNQ5BIV9 151 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 ANGPTL5Q86XS5 388 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 MKXQ8IYA7 352 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 S100A13Q99584 98 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 FAM192AQ9GZU8 254 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 TLNRD1Q9H1K6 362 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 PLGRKTQ9HBL7 147 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 BARX1Q9HBU1 254 aaPredicted RBP15.49■□□□□ 0.07
RFFL-211ENST00000584541 GCM1Q9NP62 436 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 C1orf123Q9NWV4 160 aa15.49■□□□□ 0.07
RFFL-211ENST00000584541 ZNF701M0R085 212 aaPredicted RBP15.48■□□□□ 0.07
RFFL-211ENST00000584541 TMEM225BP0DP42 221 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 DAOP14920 347 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 IL24Q13007 206 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 PDZK1IP1Q13113 114 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 RIN1Q13671 783 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 HFEQ30201 348 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 CALHM1Q8IU99 346 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 CROCCP3Q8IVE0 287 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 OR5D18Q8NGL1 313 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 TNFAIP8L1Q8WVP5 186 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 AQP3Q92482 292 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 RDH5Q92781 318 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 LURAP1Q96LR2 239 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 RBM38Q9H0Z9 239 aaKnown RBP15.48■□□□□ 0.07
RFFL-211ENST00000584541 DCSTAMPQ9H295 470 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 DLL4Q9NR61 685 aa15.48■□□□□ 0.07
RFFL-211ENST00000584541 ZNF701Q9NV72 531 aaPredicted RBP15.48■□□□□ 0.07
RFFL-211ENST00000584541 BEX4Q9NWD9 120 aaPredicted RBP15.48■□□□□ 0.07
RFFL-211ENST00000584541 DCHS2Q6V1P9 2916 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 NOTOA8MTQ0 251 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 H3BMQ9 156 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 CDC14BO60729 498 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 PAX1P15863 534 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 MPZP25189 248 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 PTGFRP43088 359 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 ATP5J2P56134 94 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 OR10A3P58181 314 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 MRPS11P82912 194 aaKnown RBP15.47■□□□□ 0.07
RFFL-211ENST00000584541 ZNF181Q2M3W8 571 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 SLC25A26Q70HW3 274 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 SAXO1Q8IYX7 474 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 C1orf87Q8N0U7 546 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 ZSCAN4Q8NAM6 433 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms