RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 SPARCP09486 303 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OPN1MW2P0DN77 364 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OPN1MW3P0DN78 364 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 COX4I1P13073 169 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 MUC1P15941 1255 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 EEF1B2P24534 225 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 SAA4P35542 130 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 NUDT2P50583 147 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 MZT1Q08AG7 82 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM189A2Q15884 450 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 LY6EQ16553 131 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 KPRPQ5T749 579 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 STUMQ69YW2 141 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 GLYATQ6IB77 296 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 WDR82Q6UXN9 313 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 Q6ZTK2 550 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 SLC16A9Q7RTY1 509 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 SLC36A1Q7Z2H8 476 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 DPY19L4Q7Z388 723 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 CMTM4Q8IZR5 234 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 GALNT4Q8N4A0 578 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OR1M1Q8NGA1 313 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OR5T2Q8NGG2 359 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OR4C15Q8NGM1 316 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OR9Q1Q8NGQ5 310 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OR5R1Q8NH85 324 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 NPRL2Q8WTW4 380 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 C17orf50Q8WW18 174 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 H1FXQ92522 213 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 TNFRSF14Q92956 283 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 SLAMF6Q96DU3 332 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 HOPXQ9BPY8 73 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OPA3Q9H6K4 179 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 EGLN3Q9H6Z9 239 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 RNPEPL1Q9HAU8 725 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 SNTG1Q9NSN8 517 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 CENPMQ9NSP4 180 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 DCAF13Q9NV06 445 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 ARGLU1Q9NWB6 273 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 ABCD2Q9UBJ2 740 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 SAMD4AQ9UPU9 718 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 hCG_38984A0A1B0GV85 526 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 ZNF878C9JN71 531 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 CDIPTO14735 213 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 SLC22A2O15244 555 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 SEMG1P04279 462 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 GYPBP06028 91 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 PAX6P26367 422 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 GRK5P34947 590 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 GSSP48637 474 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 CX3CR1P49238 355 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 EFNB2P52799 333 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM3AP98173 230 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 TAF13Q15543 124 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 LRRC10Q5BKY1 277 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 ETV3LQ6ZN32 361 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 LYG1Q8N1E2 194 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 KLHDC1Q8N7A1 406 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 RNF148Q8N7C7 305 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 SLC37A3Q8NCC5 494 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 C8orf46Q8TAG6 207 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 MRAPQ8TCY5 172 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 RORBQ92753 470 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 REEP6Q96HR9 211 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 GAFA1Q96PS6 74 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 DDOQ99489 341 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 WDR13Q9H1Z4 485 aa6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 ELL3Q9HB65 397 aaPredicted RBP6.35□□□□□ -1.39
SMCHD1-210ENST00000583800 A0A1W2PQ09 198 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 NKX6-3A6NJ46 265 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 IDH3BO43837 385 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 CLUP10909 449 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 RRM2P31350 389 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 DDOSTP39656 456 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 NAA10P41227 235 aaPredicted RBP6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 TGM4P49221 684 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 ENTPD1P49961 510 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 UBE2E1P51965 193 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 SMIM11AP58511 58 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 PSME3P61289 254 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 TSPAN31Q12999 210 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 DGUOKQ16854 277 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 KLHL12Q53G59 568 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 HCP5Q6MZN7 132 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 HACD2Q6Y1H2 254 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM57BQ71RH2 274 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 BEND2Q8NDZ0 799 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 OR9Q2Q8NGE9 314 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 OR52L1Q8NGH7 329 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 OR51G2Q8NGK0 314 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 OR8D4Q8NGM9 314 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 OR2T4Q8NH00 348 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 GNPDA2Q8TDQ7 276 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 RPL3LQ92901 407 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 SGK3Q96BR1 496 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 C12orf43Q96C57 262 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 RAB3IPQ96QF0 476 aaPredicted RBP6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 SSX3Q99909 188 aa6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 PAPOLGQ9BWT3 736 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-210ENST00000583800 TLNRD1Q9H1K6 362 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms