RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RDH10Q8IZV5 341 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 SYS1Q8N2H4 156 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 CCDC54Q8NEL0 328 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 ZNF671Q8TAW3 534 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 TRMT10AQ8TBZ6 339 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 NPRL2Q8WTW4 380 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 PELI1Q96FA3 418 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 ISG20L2Q9H9L3 353 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 SNTG1Q9NSN8 517 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 MRPS18AQ9NVS2 196 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 FRRS1LQ9P0K9 344 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 OPN4Q9UHM6 478 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 SLC7A11Q9UPY5 501 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 INSIG2Q9Y5U4 225 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 AUP1Q9Y679 476 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 CUBNO60494 3623 aa10.5□□□□□ -0.73
SMARCE1-218ENST00000582955 IGHV2-70DA0A0C4DH43 119 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 IRGMA1A4Y4 181 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 H0YAE9 185 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 H0YHG0 523 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 GATBO75879 557 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 SERPINA3P01011 423 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 ZNF20P17024 532 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 GLRA1P23415 457 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 HAAOP46952 286 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 SCGB2A2Q13296 93 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 ALKBH1Q13686 389 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 FDX2Q6P4F2 183 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 ZNF841Q6ZN19 808 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 ZNF573Q86YE8 665 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 C8orf59Q8N0T1 100 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 ZNF676Q8N7Q3 588 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 OR5T2Q8NGG2 359 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 NANPQ8TBE9 248 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 RAB40AQ8WXH6 277 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 AQP3Q92482 292 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 C12orf43Q96C57 262 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 CCL13Q99616 98 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 NUDT16L1Q9BRJ7 211 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 WDR13Q9H1Z4 485 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 RASSF4Q9H2L5 321 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 SMURF1Q9HCE7 757 aa10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 FGF20Q9NP95 211 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-218ENST00000582955 FAM230AA0A1W2PPH8 454 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 PQLC2LA1A4F0 135 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 NKX6-3A6NJ46 265 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 J3QT63 122 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 DVL1O14640 695 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 ENSAO43768 121 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 ISG15P05161 165 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 GNAO1P09471 354 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 EPHA1P21709 976 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 DCKP27707 260 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 CCR9P51686 369 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 GBX2P52951 348 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 MRPL28Q13084 256 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 ARMCX4Q5H9R4 360 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 CD276Q5ZPR3 534 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 STUMQ69YW2 141 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 SLC36A1Q7Z2H8 476 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 FAM216BQ8N7L0 139 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 OR13C3Q8NGS6 347 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 ST8SIA4Q92187 359 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 TMIGD2Q96BF3 282 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 FGGYQ96C11 551 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 C10orf35Q96D05 121 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 ZNF649Q9BS31 505 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 CHST5Q9GZS9 411 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 NLKQ9UBE8 527 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 KAAG1Q9UBP8 84 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 HHLA2Q9UM44 414 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 POLDIP2Q9Y2S7 368 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 HSPE1-MOB4S4R3N1 261 aa10.48□□□□□ -0.73
SMARCE1-218ENST00000582955 A0A1B0GW55 424 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 OR4C45A6NMZ5 311 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 C22orf46C9J442 243 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 E9PI62 339 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 SYNGR1O43759 233 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 CCDC159P0C7I6 412 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 OCM2P0CE71 109 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 OCMP0CE72 109 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DUX4L2P0CJ85 424 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DUX4L3P0CJ86 424 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DUX4L4P0CJ87 422 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DUX4L5P0CJ88 424 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DUX4L6P0CJ89 424 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DUX4L7P0CJ90 424 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 LIMS3P0CW19 117 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 LIMS4P0CW20 117 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 MYL12AP19105 171 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 GABRA2P47869 451 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 ETV1P50549 477 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 PAX2Q02962 417 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 PAX8Q06710 450 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 IKZF1Q13422 519 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 MED21Q13503 144 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 CNN3Q15417 329 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms