RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 POU3F4P49335 361 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 RBP2P50120 134 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 EFNA4P52798 201 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 ATP1B3P54709 279 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 ATP5J2P56134 94 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 ZNF529Q6P280 563 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 HAGHLQ6PII5 290 aaPredicted RBP10.27□□□□□ -0.77
IFT20-207ENST00000578547 SLC16A12Q6ZSM3 486 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 LHFPL2Q6ZUX7 228 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 RNF144BQ7Z419 303 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 LRRTM1Q86UE6 522 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 ANGPTL5Q86XS5 388 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 TGIF2LYQ8IUE0 185 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 JAGN1Q8N5M9 183 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 OR52N4Q8NGI2 321 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 OR5D18Q8NGL1 313 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 NEU4Q8WWR8 484 aaPredicted RBP10.27□□□□□ -0.77
IFT20-207ENST00000578547 KCTD7Q96MP8 289 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 GPER1Q99527 375 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 FAM192AQ9GZU8 254 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 FN3KRPQ9HA64 309 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 SNTG1Q9NSN8 517 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 ZNF701Q9NV72 531 aaPredicted RBP10.27□□□□□ -0.77
IFT20-207ENST00000578547 C1orf123Q9NWV4 160 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 PPP1R3CQ9UQK1 317 aa10.27□□□□□ -0.77
IFT20-207ENST00000578547 LRP5LA4QPB2 252 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 CCDC160A6NGH7 325 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 CDIPTO14735 213 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 SSX4O60224 188 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 NOL3O60936 208 aaKnown RBP10.26□□□□□ -0.77
IFT20-207ENST00000578547 F12P00748 615 aaPredicted RBP10.26□□□□□ -0.77
IFT20-207ENST00000578547 DAOP14920 347 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 PAX1P15863 534 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 ADRA2CP18825 462 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 GMFBP60983 142 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 NCS1P62166 190 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 BLMHQ13867 455 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 KISS1Q15726 138 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 DEFB113Q30KQ7 82 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 ZNF826PQ6ZT77 177 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 ZNF573Q86YE8 665 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 BATF2Q8N1L9 274 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 CELF2-AS1Q8N7Q2 184 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 BOLLQ8N9W6 283 aaKnown RBP10.26□□□□□ -0.77
IFT20-207ENST00000578547 SCCPDHQ8NBX0 429 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 CCL17Q92583 94 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 NINJ1Q92982 152 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 MBD6Q96DN6 1003 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 CPNE2Q96FN4 548 aaPredicted RBP10.26□□□□□ -0.77
IFT20-207ENST00000578547 OR51I2Q9H344 312 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 GCM1Q9NP62 436 aa10.26□□□□□ -0.77
IFT20-207ENST00000578547 BEX4Q9NWD9 120 aaPredicted RBP10.26□□□□□ -0.77
IFT20-207ENST00000578547 AK6Q9Y3D8 172 aaKnown RBP10.26□□□□□ -0.77
IFT20-207ENST00000578547 SHISA3A0PJX4 238 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 J3QT63 122 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 SYNGR1O43759 233 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 ALX3O95076 343 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 GABARAPO95166 117 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 IRF2P14316 349 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 SDC2P34741 201 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 ZNF93P35789 620 aaPredicted RBP10.25□□□□□ -0.77
IFT20-207ENST00000578547 OR3A4PP47883 348 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 VBP1P61758 197 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 MXD1Q05195 221 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 HFEQ30201 348 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 GDPGP1Q6ZNW5 385 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 SLC25A26Q70HW3 274 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 ANKRD13BQ86YJ7 626 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 CALHM1Q8IU99 346 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 NKAIN3Q8N8D7 197 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 PNLDC1Q8NA58 520 aaKnown RBP10.25□□□□□ -0.77
IFT20-207ENST00000578547 OR11L1Q8NGX0 322 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 TNFAIP8L1Q8WVP5 186 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 RDH5Q92781 318 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 YIPF5Q969M3 257 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 SLAMF9Q96A28 289 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 GSX2Q9BZM3 304 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 METTL17Q9H7H0 456 aaPredicted RBP10.25□□□□□ -0.77
IFT20-207ENST00000578547 BARX1Q9HBU1 254 aaPredicted RBP10.25□□□□□ -0.77
IFT20-207ENST00000578547 DCAF16Q9NXF7 216 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 CCDC168Q8NDH2 2452 aa10.25□□□□□ -0.77
IFT20-207ENST00000578547 ARID1AO14497 2285 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 TRAV1-2A0A0B4J238 106 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 MEGF11A6BM72 1044 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 LRRC30A6NM36 301 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 PDCD5O14737 125 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 SPRY1O43609 319 aaPredicted RBP10.24□□□□□ -0.77
IFT20-207ENST00000578547 ANGPTL7O43827 346 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 RHBDL1O75783 438 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 CDRT1O95170 752 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 PTBP3O95758 552 aaKnown RBP10.24□□□□□ -0.77
IFT20-207ENST00000578547 CYB5R3P00387 301 aaPredicted RBP10.24□□□□□ -0.77
IFT20-207ENST00000578547 ALDOBP05062 364 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 CLEC2LP0C7M8 214 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 TMEM225BP0DP42 221 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 RAB3BP20337 219 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 COL8A2P25067 703 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 PMELP40967 661 aa10.24□□□□□ -0.77
IFT20-207ENST00000578547 GATA4P43694 442 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms