RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 WDR13Q9H1Z4 485 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 NELFAQ9H3P2 528 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 FN3KRPQ9HA64 309 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 A0A0A6YYH2 397 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 A6NJ64 397 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 HMSDA8MTL9 139 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 ETV2O00321 342 aaPredicted RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 TERTO14746 1132 aaKnown RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 SPRY1O43609 319 aaPredicted RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 DKK1O94907 266 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 P04436 131 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 TMEM225BP0DP42 221 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 HIST1H1DP16402 221 aaKnown RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 ENDOGQ14249 297 aaKnown RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 ZNF774Q6NX45 483 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 TMEM65Q6PI78 240 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 NAXDQ8IW45 347 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 MAML2Q8IZL2 1156 aaPredicted RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 OR52M1Q8NGK5 317 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 OR2Y1Q8NGV0 311 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 OR14K1Q8NGZ2 314 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 RNF138Q8WVD3 245 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 FBXO17Q96EF6 278 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 HDHD3Q9BSH5 251 aaPredicted RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 TMPRSS13Q9BYE2 586 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 ALX4Q9H161 411 aaPredicted RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 ACKR4Q9NPB9 350 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 GSKIPQ9P0R6 139 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 PISDQ9UG56 409 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 FOXD3Q9UJU5 478 aaPredicted RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 NXT1Q9UKK6 140 aaKnown RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 NUP50Q9UKX7 468 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 ADAMTS9Q9P2N4 1935 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 CPAMD8Q8IZJ3 1885 aa7.68□□□□□ -1.18
LINC00558-201ENST00000569422 PRRC2CQ9Y520 2896 aaKnown RBP7.68□□□□□ -1.18
LINC00558-201ENST00000569422 KANTRA0A1W2PQU2 76 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 MPTX1A8MV57 137 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 TSPAN4O14817 238 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 LCATP04180 440 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 PGAM2P15259 253 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 MGMTP16455 207 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 CCNOP22674 350 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 ZBTB25P24278 435 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 NTF4P34130 210 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 SERPINF1P36955 418 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 CASP6P55212 293 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 GRB2P62993 217 aaKnown RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 DHODHQ02127 395 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 EXT1Q16394 746 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 PGAP1Q75T13 922 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 HDDC2Q7Z4H3 204 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 C6orf201Q7Z4U5 140 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 SLC25A42Q86VD7 318 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 TMEM105Q8N8V8 129 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 OR5H2Q8NGV7 314 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 SCARB1Q8WTV0 552 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 FBXW5Q969U6 566 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 PTX4Q96A99 478 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 NARS2Q96I59 477 aaKnown RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 URM1Q9BTM9 101 aaKnown RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 OR10A2Q9H208 303 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 ZNF581Q9P0T4 197 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 FRYQ5TBA9 3013 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 CCDC187A0A096LP49 1063 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 F5H0A9 414 aaPredicted RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 F8W036 122 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 GLI4P10075 376 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 GLRA1P23415 457 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 ADH6P28332 368 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 PTGFRP43088 359 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 SNU13P55769 128 aaKnown RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 TSC22D1Q15714 1073 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 HFEQ30201 348 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 SPINK14Q6IE38 97 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 C11orf87Q6NUJ2 197 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 PDZD9Q8IXQ8 264 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 OR2C3Q8N628 320 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 THAP6Q8TBB0 222 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 TNFRSF14Q92956 283 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 NAA11Q9BSU3 229 aaPredicted RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 ANGPTL4Q9BY76 406 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 MOB1AQ9H8S9 216 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 WDR54Q9H977 334 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 EHFQ9NZC4 300 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 CHRM2P08172 466 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 ZNF84P51523 738 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 MTCP1P56278 107 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 H3F3AP84243 136 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 BTN1A1Q13410 526 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 HIST3H3Q16695 136 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 RSPO1Q2MKA7 263 aaPredicted RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 TUSC1Q2TAM9 212 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 DYRK2Q92630 601 aa7.67□□□□□ -1.18
LINC00558-201ENST00000569422 C1orf147Q96MC9 270 aaPredicted RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 NECAB3Q96P71 396 aaPredicted RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 METTL8Q9H825 291 aaKnown RBP7.67□□□□□ -1.18
LINC00558-201ENST00000569422 LOC102723996A0A087X1L8 192 aa7.66□□□□□ -1.18
LINC00558-201ENST00000569422 MFSD2BA6NFX1 497 aa7.66□□□□□ -1.18
LINC00558-201ENST00000569422 EIF1BO60739 113 aaKnown RBP7.66□□□□□ -1.18
LINC00558-201ENST00000569422 CYTIPO60759 359 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms