RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 LMX1BO60663 402 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 TNFAIP8O95379 198 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 CYB5AP00167 134 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 HSMCR30P0CW71 290 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 CPT2P23786 658 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 AZGP1P25311 298 aaKnown RBP10.24□□□□□ -0.77
SF3B3-208ENST00000567250 PSMA1P25786 263 aaKnown RBP10.24□□□□□ -0.77
SF3B3-208ENST00000567250 CFHR2P36980 270 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 HAAOP46952 286 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 GZMKP49863 264 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 ATP1B3P54709 279 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 PPP3R1P63098 170 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 GPR50Q13585 617 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 TRAM1Q15629 374 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 WDR82Q6UXN9 313 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 MS4A15Q8N5U1 240 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 SCCPDHQ8NBX0 429 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 OR13C9Q8NGT0 318 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 CLDND2Q8NHS1 167 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF671Q8TAW3 534 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 TRMT10AQ8TBZ6 339 aaKnown RBP10.24□□□□□ -0.77
SF3B3-208ENST00000567250 NPRL2Q8WTW4 380 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 LRRC29Q8WV35 223 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 RGP1Q92546 391 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-208ENST00000567250 OPALINQ96PE5 141 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 OR5M11Q96RB7 305 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 PKIBQ9C010 78 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 ZCCHC4Q9H5U6 513 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 NARFLQ9H6Q4 476 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 PPP1R3EQ9H7J1 279 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 PCDHB10Q9UN67 800 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 TRAV38-1A0A0B4J264 116 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 TRBV5-5A0A0J9YX44 114 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 FAM230AA0A1W2PPH8 454 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 OOEPA6NGQ2 149 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 SRRM5B3KS81 715 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 MAGEB3O15480 346 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 SULT1B1O43704 296 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 ALX3O95076 343 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 HCKP08631 526 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 ATF1P18846 271 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 RAB3AP20336 220 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 SOX2P48431 317 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 RBP2P50120 134 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 ZMYND11Q15326 602 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 UBE2V2Q15819 145 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 TMEM249Q2WGJ8 235 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF404Q494X3 552 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 HAGHLQ6PII5 290 aaPredicted RBP10.23□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF773Q6PK81 442 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 DCDC5Q6ZRR9 648 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF826PQ6ZT77 177 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 NLRC3Q7RTR2 1065 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 CIARTQ8N365 385 aaPredicted RBP10.23□□□□□ -0.77
SF3B3-208ENST00000567250 GCSAMQ8N6F7 178 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 RPL3LQ92901 407 aaKnown RBP10.23□□□□□ -0.77
SF3B3-208ENST00000567250 MGLLQ99685 303 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 FGF23Q9GZV9 251 aaPredicted RBP10.23□□□□□ -0.77
SF3B3-208ENST00000567250 OR51I2Q9H344 312 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 ACOT13Q9NPJ3 140 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 DCAF16Q9NXF7 216 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 DNAJB11Q9UBS4 358 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 LRRC42Q9Y546 428 aa10.23□□□□□ -0.77
SF3B3-208ENST00000567250 SIRT4Q9Y6E7 314 aaPredicted RBP10.23□□□□□ -0.77
SF3B3-208ENST00000567250 F8P00451 2351 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 LGALS8O00214 317 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 NDUFA2O43678 99 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 IGHV2-5P01817 119 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 RPS2P15880 293 aaKnown RBP10.22□□□□□ -0.77
SF3B3-208ENST00000567250 MUC1P15941 1255 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-208ENST00000567250 FSTP19883 344 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 MPZP25189 248 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 PMELP40967 661 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 IL24Q13007 206 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 MICBQ29980 383 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 LRRC28Q86X40 367 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-208ENST00000567250 BOLLQ8N9W6 283 aaKnown RBP10.22□□□□□ -0.77
SF3B3-208ENST00000567250 MAPK1IP1LQ8NDC0 245 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 AQP3Q92482 292 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 C12orf43Q96C57 262 aaKnown RBP10.22□□□□□ -0.77
SF3B3-208ENST00000567250 OR14A2Q96R54 314 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF665Q9H7R5 613 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 VCX3AQ9NNX9 186 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 MIOXQ9UGB7 285 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 YLPM1P49750 1951 aaKnown RBP10.22□□□□□ -0.77
SF3B3-208ENST00000567250 MED13LQ71F56 2210 aa10.22□□□□□ -0.77
SF3B3-208ENST00000567250 ZANQ9Y493 2812 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF879B4DU55 563 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 LHBP01229 141 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 CPEP16870 476 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 GLRA1P23415 457 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 CD80P33681 288 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 MAP2K4P45985 399 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 MTCP1P56278 107 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 EMX1Q04741 257 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-208ENST00000567250 TPBGQ13641 420 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 SMIM21Q3B7S5 101 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 DMRTC1Q5HYR2 192 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 LIPKQ5VXJ0 399 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 TEX36Q5VZQ5 186 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms