RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 J3QT63 122 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 ZNF701M0R085 212 aaPredicted RBP6.6□□□□□ -1.35
CDH1-208ENST00000565810 CDIPTO14735 213 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 TMEM127O75204 238 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 IL1AP01583 271 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 TMEM225BP0DP42 221 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 GATA4P43694 442 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 POU3F4P49335 361 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 EFNA4P52798 201 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 ZNF154Q13106 437 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 PDZK1IP1Q13113 114 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 HFEQ30201 348 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 PRAMEF6Q5VXH4 476 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 ASPHD2Q6ICH7 369 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 SLC16A12Q6ZSM3 486 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 MOGAT3Q86VF5 341 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 ANGPTL5Q86XS5 388 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 C1orf87Q8N0U7 546 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 ZSCAN4Q8NAM6 433 aaPredicted RBP6.6□□□□□ -1.35
CDH1-208ENST00000565810 TNFAIP8L1Q8WVP5 186 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 CCL17Q92583 94 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 RDH5Q92781 318 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 RFT1Q96AA3 541 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 DGCR14Q96DF8 476 aaKnown RBP6.6□□□□□ -1.35
CDH1-208ENST00000565810 SPACA5Q96QH8 159 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 PKIBQ9C010 78 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 DCSTAMPQ9H295 470 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 ELL3Q9HB65 397 aaPredicted RBP6.6□□□□□ -1.35
CDH1-208ENST00000565810 BARX1Q9HBU1 254 aaPredicted RBP6.6□□□□□ -1.35
CDH1-208ENST00000565810 DLL4Q9NR61 685 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 UFSP2Q9NUQ7 469 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 C1orf123Q9NWV4 160 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 GHRLQ9UBU3 117 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 ING4Q9UNL4 249 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 PPP1R3CQ9UQK1 317 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 PLEKHA6Q9Y2H5 1048 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 PKDREJQ9NTG1 2253 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 FASNP49327 2511 aaKnown RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 HEATR1Q9H583 2144 aaKnown RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 ABCA4P78363 2273 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 IGHV1-69-2A0A0G2JMI3 117 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 SHISA3A0PJX4 238 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 H3BMQ9 156 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 TRAPPC2LH3BP13 241 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 OVOL3O00110 214 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 SLC17A2O00624 439 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 CDC14BO60729 498 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 ZNF780AO75290 641 aaPredicted RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 PTBP3O95758 552 aaKnown RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 F12P00748 615 aaPredicted RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 PLATP00750 562 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 HPXP02790 462 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 CSTBP04080 98 aaKnown RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 UBBP0CG47 229 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 DAOP14920 347 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 ADRA2CP18825 462 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 HTR2CP28335 458 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 SOX6P35712 828 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 PTGFRP43088 359 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 RORCP51449 518 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 BMXP51813 675 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 CAPZA1P52907 286 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 ATP5J2P56134 94 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 KRTAP10-9P60411 292 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 MRPS11P82912 194 aaKnown RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 IL24Q13007 206 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 RIN1Q13671 783 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 GPR176Q14439 515 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 MPPED2Q15777 294 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 RAB11BQ15907 218 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 ZNF181Q2M3W8 571 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 AWAT2Q6E213 333 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 SFXN4Q6P4A7 337 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 SLC25A26Q70HW3 274 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 PEG10Q86TG7 708 aaKnown RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 Q8IYB0 196 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 SAXO1Q8IYX7 474 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 SCCPDHQ8NBX0 429 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 PXT1Q8NFP0 134 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 OR5D18Q8NGL1 313 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 OR6M1Q8NGM8 313 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 OR10Z1Q8NGY1 313 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 OR51F2Q8NH61 342 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 AQP3Q92482 292 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 NINJ1Q92982 152 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 C12orf43Q96C57 262 aaKnown RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 FGF23Q9GZV9 251 aaPredicted RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 METTL9Q9H1A3 318 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 TLNRD1Q9H1K6 362 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 LIME1Q9H400 295 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 CNTD2Q9H8S5 307 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 SMURF1Q9HCE7 757 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 GCM1Q9NP62 436 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 MYOZ1Q9NP98 299 aaPredicted RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 BEX4Q9NWD9 120 aaPredicted RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 RNF7Q9UBF6 113 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 STEAP1Q9UHE8 339 aa6.59□□□□□ -1.35
CDH1-208ENST00000565810 MRPS28Q9Y2Q9 187 aaKnown RBP6.59□□□□□ -1.35
CDH1-208ENST00000565810 USP9YO00507 2555 aaPredicted RBP6.59□□□□□ -1.36
CDH1-208ENST00000565810 TENM4Q6N022 2769 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms