RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	POLR2J3	Q9H1A7	115 aa	Known RBP	4.2	□□□□□ -1.74
TCF4-223	ENST00000564343	SYT4	Q9H2B2	425 aa		4.2	□□□□□ -1.74
TCF4-223	ENST00000564343	PPA2	Q9H2U2	334 aa		4.2	□□□□□ -1.74
TCF4-223	ENST00000564343	RHCG	Q9UBD6	479 aa		4.2	□□□□□ -1.74
TCF4-223	ENST00000564343	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.2	□□□□□ -1.74
TCF4-223	ENST00000564343	FAM96B	Q9Y3D0	163 aa		4.2	□□□□□ -1.74
TCF4-223	ENST00000564343	LHFPL6	Q9Y693	200 aa		4.2	□□□□□ -1.74
TCF4-223	ENST00000564343	DSCAML1	Q8TD84	2053 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343		A0A087WUU8	490 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	TRAV38-1	A0A0B4J264	116 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343		A0A1B0GVI7	797 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ANKRD61	A6NGH8	418 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	FAM90A7P	A6NKC0	464 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	SH2D7	A6NKC9	451 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	FAM90A22P	A8MWA6	464 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	FAM90A12P	A8MX19	464 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	FAM90A23P	A8MXZ1	464 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	EFCAB9	A8MZ26	197 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	PRR23D1	E9PI22	279 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343		F5H5K5	113 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	LGALS8	O00214	317 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	XKRY	O14609	159 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ANGPT2	O15123	496 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	AHCYL1	O43865	530 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	PTBP3	O95758	552 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	TOMM40	O96008	361 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	LHB	P01229	141 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	MBP	P02686	304 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	CD14	P08571	375 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	VIM	P08670	466 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	FBP1	P09467	338 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ACSM4	P0C7M7	580 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	PAX6	P26367	422 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	DUSP1	P28562	367 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	GABRA5	P31644	462 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	SAA4	P35542	130 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	RPL4	P36578	427 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	CDKN2A	P42771	156 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	EFNB2	P52799	333 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	FXYD6P3	P58550	94 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	OR8G1	Q15617	311 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	KCNJ8	Q15842	424 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	SNAI3	Q3KNW1	292 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	KRTAP27-1	Q3LI81	207 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ANKDD1A	Q495B1	522 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ZBED5	Q49AG3	693 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	METAP1D	Q6UB28	335 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	CFAP77	Q6ZQR2	320 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343		Q6ZTK2	550 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	GCSAM	Q8N6F7	178 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343		Q8N7P7	452 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	LY6G5B	Q8NDX9	201 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	GJC3	Q8NFK1	279 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	BCAS4	Q8TDM0	211 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	C17orf50	Q8WW18	174 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	SGCD	Q92629	289 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	PHF21A	Q96BD5	680 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	TLCD1	Q96CP7	247 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	SEH1L	Q96EE3	360 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	TPD52L3	Q96J77	140 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	PRRC1	Q96M27	445 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ZNF570	Q96NI8	536 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	COQ7	Q99807	217 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ADAT1	Q9BUB4	502 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ELOVL1	Q9BW60	279 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	HCAR1	Q9BXC0	346 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	HDHD2	Q9H0R4	259 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	MMP28	Q9H239	520 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	FN3KRP	Q9HA64	309 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.19	□□□□□ -1.74	1e-6	■■□□□ 14.2
TCF4-223	ENST00000564343	SIRT7	Q9NRC8	400 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	NECAP2	Q9NVZ3	263 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	PPP1R14D	Q9NXH3	145 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	NKIRAS1	Q9NYS0	192 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ADA2	Q9NZK5	511 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ONECUT1	Q9UBC0	465 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	ATPIF1	Q9UII2	106 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	RPS6KA6	Q9UK32	745 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	KPTN	Q9Y664	436 aa		4.19	□□□□□ -1.74
TCF4-223	ENST00000564343	hCG_1807616	A0A1W2PRN6	198 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	MEIOC	A2RUB1	952 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	HTR3E	A5X5Y0	456 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	BTBD17	A6NE02	478 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	GAGE10	A6NGK3	116 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	CD300LB	A8K4G0	201 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	NPIPB5	A8MRT5	1133 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	FXYD1	O00168	92 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	TSPAN4	O14817	238 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	NPFF	O15130	113 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	NDUFA2	O43678	99 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	PTP4A3	O75365	173 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	KHDRBS3	O75525	346 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	PPP1R3D	O95685	299 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	ECD	O95905	644 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	LCAT	P04180	440 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms