RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 SLC25A30Q5SVS4 291 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 CLVS2Q5SYC1 327 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 OGFRL1Q5TC84 451 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 TMEM244Q5VVB8 128 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 HAGHLQ6PII5 290 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 BTNL3Q6UXE8 466 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 TMPRSS11AQ6ZMR5 421 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 KCTD20Q7Z5Y7 419 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 LRRC28Q86X40 367 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 CATSPERDQ86XM0 798 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 RDH10Q8IZV5 341 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 BATF2Q8N1L9 274 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 STX19Q8N4C7 294 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 BPIFB6Q8NFQ5 453 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 OR52I1Q8NGK6 324 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 OR13C3Q8NGS6 347 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 ZNF671Q8TAW3 534 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 RORBQ92753 470 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 NEIL1Q96FI4 390 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 TMEM246Q9BRR3 403 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 SSBP3Q9BWW4 388 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 RNPEPL1Q9HAU8 725 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 PATZ1Q9HBE1 687 aaKnown RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 TRIM36Q9NQ86 728 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 G6PC2Q9NQR9 355 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 SNTG1Q9NSN8 517 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 ERVK-18Q9QC07 812 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 CLN8Q9UBY8 286 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 NKX1-2Q9UD57 310 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 EXOGQ9Y2C4 368 aaKnown RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 MYRFQ9Y2G1 1151 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 NIPBLQ6KC79 2804 aaeCLIP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 ANKRD61A6NGH8 418 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 OR5B21A6NL26 309 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 LGALS8O00214 317 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 MYL12BO14950 172 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 AKR7A2O43488 359 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 GABRB1P18505 474 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 THBS2P35442 1172 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 HAAOP46952 286 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 SEC61A1P61619 476 aaKnown RBP6.7□□□□□ -1.34
LRRC28-219ENST00000560483 SCGB2A2Q13296 93 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 IKZF1Q13422 519 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 GALEQ14376 348 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 ZNF181Q2M3W8 571 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 CEACAM21Q3KPI0 293 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 ZNF404Q494X3 552 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 CDONQ4KMG0 1287 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 DCDC5Q6ZRR9 648 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 AHSA2Q719I0 299 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 SCCPDHQ8NBX0 429 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 OR5T2Q8NGG2 359 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 OR2G2Q8NGZ5 317 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 Q8TCH9 128 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 APH1BQ8WW43 257 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 OR5P3Q8WZ94 311 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 ST8SIA4Q92187 359 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 TMEM80Q96HE8 168 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 MRI1Q9BV20 369 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 TMPRSS13Q9BYE2 586 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 ISG20L2Q9H9L3 353 aaKnown RBP6.7□□□□□ -1.34
LRRC28-219ENST00000560483 TMEM165Q9HC07 324 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 NEK6Q9HC98 313 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 INPP5EQ9NRR6 644 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 ERVK13-1Q9NX77 482 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 DHDHQ9UQ10 334 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 ABCA2Q9BZC7 2435 aa6.7□□□□□ -1.34
LRRC28-219ENST00000560483 TRBV2A0A0J9YWF9 115 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 PNMA8CA0A1B0GUJ8 204 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 EFCAB10A6NFE3 127 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 A6NHS1 94 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 H0YAE9 185 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 DLGAP1O14490 977 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 CASQ2O14958 399 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-219ENST00000560483 WBP4O75554 376 aaKnown RBP6.69□□□□□ -1.34
LRRC28-219ENST00000560483 CYB5AP00167 134 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 HCKP08631 526 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 GNAO1P09471 354 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 CCDC159P0C7I6 412 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 EGR1P18146 543 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 ADRA2CP18825 462 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 DCKP27707 260 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 POU3F4P49335 361 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 AQP4P55087 323 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 MRPL28Q13084 256 aaKnown RBP6.69□□□□□ -1.34
LRRC28-219ENST00000560483 ALKBH1Q13686 389 aaKnown RBP6.69□□□□□ -1.34
LRRC28-219ENST00000560483 CNN3Q15417 329 aaKnown RBP6.69□□□□□ -1.34
LRRC28-219ENST00000560483 ARMCX4Q5H9R4 360 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 ZBTB37Q5TC79 503 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 LYPD2Q6UXB3 125 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 WDR82Q6UXN9 313 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 IZUMO2Q6UXV1 221 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 SLC36A1Q7Z2H8 476 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 ZNF573Q86YE8 665 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 PRSS35Q8N3Z0 413 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 TEX29Q8N6K0 151 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 CCDC54Q8NEL0 328 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 OR5A2Q8NGI9 324 aa6.69□□□□□ -1.34
LRRC28-219ENST00000560483 OR14K1Q8NGZ2 314 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms