RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 GNG10P50151 68 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 FAAP20Q6NZ36 180 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLC48A1Q6P1K1 146 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLAMF8Q9P0V8 285 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 M0R082 166 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 ORM2P19652 201 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 EVX1P49640 407 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 HERPUD1Q15011 391 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 NUFIP2Q7Z417 695 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 TMEM183AQ8IXX5 376 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF383Q8NA42 475 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 DUSP18Q8NEJ0 188 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR10G4Q8NGN3 311 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR10G9Q8NGN4 311 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR10G7Q8NGN6 311 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 DPH3Q96FX2 82 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLC25A22Q9H936 323 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 B4E171 279 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 C1SP09871 688 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 PTGFRP43088 359 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 COMPP49747 757 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 SELENBP1Q13228 472 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 FAM26EQ8N5C1 309 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 AUP1Q9Y679 476 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 FIGNL2A6NMB9 653 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 PDE6DO43924 150 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 HTN1P15515 57 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 ATF1P18846 271 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 THBS4P35443 961 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 AESQ08117 197 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 KHDC3LQ587J8 217 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 MS4A8Q9BY19 250 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 FAM208AQ9UK61 1670 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 AKR7A2O43488 359 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 TMEM136Q6ZRR5 245 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF502Q8TBZ5 544 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 VN1R17PQ8TDU5 208 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 PIK3IP1Q96FE7 263 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 IGHA1P01876 353 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 IGHA2P01877 340 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 TNFRSF1AP19438 455 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 STAC2Q6ZMT1 411 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 HTR3DQ70Z44 454 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZC3H3Q8IXZ2 948 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 FAM169BQ8N8A8 192 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 NUDCD2Q8WVJ2 157 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 HAPLN2Q9GZV7 340 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 TRAV1-2A0A0B4J238 106 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF865P0CJ78 1059 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 PGA4P0DJD7 388 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 PGA5P0DJD9 388 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 COL8A1P27658 744 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 PITX1P78337 314 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 PTRH1Q86Y79 214 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 CA5BP1Q8WTZ4 195 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 INSM2Q96T92 566 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 DEFB127Q9H1M4 99 aa12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-202ENST00000559989 IL13RA2Q14627 380 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR5C1Q8NGR4 320 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 DYNLRB2Q8TF09 96 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 RBFOX3A6NFN3 312 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 ELAVL1Q15717 326 aaKnown RBP12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF77Q15935 545 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 SPPL3Q8TCT6 385 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 ADTRPQ96IZ2 230 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 C20orf141Q9NUB4 165 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR6C3Q9NZP0 311 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF749O43361 778 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 ID1P41134 155 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 RAB9AP51151 201 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 TWIST1Q15672 202 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 BTLAQ7Z6A9 289 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 CMC2Q9NRP2 79 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 A0A096LPE4 126 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 A0A1W2PPZ6 126 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 WTIPA6NIX2 430 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 SOX15O60248 233 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 PGPEP1Q9NXJ5 209 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLC25A26Q70HW3 274 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 SYT8Q8NBV8 401 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 HIST1H4GQ99525 98 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 NARFLQ9H6Q4 476 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 IL36GQ9NZH8 169 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR2W5A6NFC9 320 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 DSCR3O14972 297 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLC2A10O95528 541 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 CEACAM3P40198 252 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 FBXL17Q9UF56 701 aa12.48□□□□□ -0.41
CSPG4P12-202ENST00000559989 CRYABP02511 175 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 ELFN2Q5R3F8 820 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms