RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ARL6IP5O75915 188 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 GABARAPO95166 117 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 TNFRSF1AP19438 455 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 RAB3AP20336 220 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 PRKACBP22694 351 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 TNFSF4P23510 183 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 DNASE1P24855 282 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 HSD17B12Q53GQ0 312 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 FAM166AQ6J272 317 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 WDR82Q6UXN9 313 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 LHFPL2Q6ZUX7 228 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 CALHM1Q8IU99 346 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 TGIF2LYQ8IUE0 185 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 AQP3Q92482 292 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 RPL3LQ92901 407 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 RNF170Q96K19 258 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 VRK1Q99986 396 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 PKIBQ9C010 78 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 EGLN1Q9GZT9 426 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 MYOZ1Q9NP98 299 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 TMEM138Q9NPI0 162 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 ZNF469Q96JG9 3925 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 PRRC2AP48634 2157 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 IFNL4K9M1U5 179 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 COL8A2P25067 703 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 GIFP27352 417 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 BDKRB2P30411 391 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 RBP2P50120 134 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 GPM6AP51674 278 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 IL24Q13007 206 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 RIN1Q13671 783 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 BLMHQ13867 455 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 CTF1Q16619 201 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 TIMM50Q3ZCQ8 353 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 PRAMEF6Q5VXH4 476 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 PRSS57Q6UWY2 283 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 ZNF573Q86YE8 665 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 SCCPDHQ8NBX0 429 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 Q8NFD4 153 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 OR52N4Q8NGI2 321 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 OR10Z1Q8NGY1 313 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 OR8S1Q8NH09 359 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 RDH5Q92781 318 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 CENPOQ9BU64 300 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 BARX1Q9HBU1 254 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 SLC7A11Q9UPY5 501 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 CACNG2Q9Y698 323 aa12.48□□□□□ -0.41
SNRPA1-207ENST00000559309 A0A0G2JK05 382 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 IGHV1-69-2A0A0G2JMI3 117 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 LY6HO94772 140 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 DAOP14920 347 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 MTNR1BP49286 362 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 KISS1Q15726 138 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 C1orf100Q5SVJ3 147 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 C22orf42Q6IC83 251 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 NR2C2APQ86WQ0 139 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 GCSAMQ8N6F7 178 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 NKAIN3Q8N8D7 197 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 BORCS8Q96FH0 119 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 C1orf147Q96MC9 270 aaPredicted RBP12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 HIST1H2AAQ96QV6 131 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 FOXC2Q99958 501 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 METTL17Q9H7H0 456 aaPredicted RBP12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 HES4Q9HCC6 221 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 DLL4Q9NR61 685 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 SNTG1Q9NSN8 517 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 DECR2Q9NUI1 292 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 DCAF16Q9NXF7 216 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 SSR3Q9UNL2 185 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 PPP1R3CQ9UQK1 317 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 ARID1AO14497 2285 aa12.47□□□□□ -0.41
SNRPA1-207ENST00000559309 MEGF11A6BM72 1044 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 VWC2LB2RUY7 222 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 SRRM5B3KS81 715 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 J3QT63 122 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 ERCC1P07992 297 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 CALRP27797 417 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 ATP1B3P54709 279 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 PDZK1IP1Q13113 114 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 GPR141Q7Z602 305 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 MOGAT3Q86VF5 341 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 SAXO1Q8IYX7 474 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 ZSCAN4Q8NAM6 433 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 BCL7BQ9BQE9 202 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 CHCHD6Q9BRQ6 235 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 NAA50Q9GZZ1 169 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 RNF167Q9H6Y7 350 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 CKLFQ9UBR5 152 aa12.46□□□□□ -0.41
SNRPA1-207ENST00000559309 MED13LQ71F56 2210 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 A0A096LNT2 108 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 IGKV1-12A0A0C4DH73 117 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 LYNX1G3V0Z9 82 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 TMEM178BH3BS89 294 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 CDIPTO14735 213 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 TNFRSF13BO14836 293 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms