RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 TMEM165Q9HC07 324 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 IGKV1-9A0A0C4DH69 117 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 MRPS14O60783 128 aaKnown RBP21.44■■□□□ 1.02
SMAD6-202ENST00000557916 FSTL3O95633 263 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 HEXAP06865 529 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 ATF1P18846 271 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 CFHR2P36980 270 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 HAAOP46952 286 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 LMO4P61968 165 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 TMEM155Q4W5P6 130 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 HAGHLQ6PII5 290 aaPredicted RBP21.44■■□□□ 1.02
SMAD6-202ENST00000557916 MUC20Q8N307 709 aaPredicted RBP21.44■■□□□ 1.02
SMAD6-202ENST00000557916 PARP16Q8N5Y8 322 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 C19orf18Q8NEA5 215 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 OR5D14Q8NGL3 314 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 OR13C5Q8NGS8 318 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 OR13C9Q8NGT0 318 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 ZCCHC4Q9H5U6 513 aa21.44■■□□□ 1.02
SMAD6-202ENST00000557916 CD2P06729 351 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 OCMP0CE72 109 aaPredicted RBP21.43■■□□□ 1.02
SMAD6-202ENST00000557916 HSMCR30P0CW71 290 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 CD80P33681 288 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 RPS11P62280 158 aaKnown RBP eCLIP21.43■■□□□ 1.02
SMAD6-202ENST00000557916 TBCEQ15813 527 aaPredicted RBP21.43■■□□□ 1.02
SMAD6-202ENST00000557916 SPICQ8N5J4 248 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 DEFB108BQ8NET1 73 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 OR10Z1Q8NGY1 313 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 AQP3Q92482 292 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 TMEM106AQ96A25 262 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 BORCS8Q96FH0 119 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 ZNF665Q9H7R5 613 aa21.43■■□□□ 1.02
SMAD6-202ENST00000557916 TRBV5-5A0A0J9YX44 114 aa21.42■■□□□ 1.02
SMAD6-202ENST00000557916 RHBDL1O75783 438 aa21.42■■□□□ 1.02
SMAD6-202ENST00000557916 EGR1P18146 543 aa21.42■■□□□ 1.02
SMAD6-202ENST00000557916 PRKACBP22694 351 aa21.42■■□□□ 1.02
SMAD6-202ENST00000557916 AZGP1P25311 298 aaKnown RBP21.42■■□□□ 1.02
SMAD6-202ENST00000557916 SFRP4Q6FHJ7 346 aaPredicted RBP21.42■■□□□ 1.02
SMAD6-202ENST00000557916 DNAAF1Q8NEP3 725 aa21.42■■□□□ 1.02
SMAD6-202ENST00000557916 ZNF671Q8TAW3 534 aa21.42■■□□□ 1.02
SMAD6-202ENST00000557916 PCDHB10Q9UN67 800 aa21.42■■□□□ 1.02
SMAD6-202ENST00000557916 C3orf80F5H4A9 247 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 LGALS8O00214 317 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 IGHV2-5P01817 119 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 IGHV4-31P0DP07 118 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 GZMKP49863 264 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 ZNF404Q494X3 552 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 Q499Y3 187 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 CLEC9AQ6UXN8 241 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 ANGPTL5Q86XS5 388 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 SPSB1Q96BD6 273 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 RAB39BQ96DA2 213 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 GSX1Q9H4S2 264 aaPredicted RBP21.41■■□□□ 1.02
SMAD6-202ENST00000557916 ISYNA1Q9NPH2 558 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 ACOT13Q9NPJ3 140 aa21.41■■□□□ 1.02
SMAD6-202ENST00000557916 IGKV1-27A0A075B6S5 117 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 OOEPA6NGQ2 149 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 SRRM5B3KS81 715 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 J3QT63 122 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 AKR7A2O43488 359 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 LY6G6DO95868 133 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 RBP2P50120 134 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 ATP1B3P54709 279 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 EMX1Q04741 257 aaPredicted RBP21.4■■□□□ 1.02
SMAD6-202ENST00000557916 GPR50Q13585 617 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 CALHM1Q8IU99 346 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 SVOPQ8N4V2 548 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 UFD1Q92890 307 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 OPALINQ96PE5 141 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 TMEM246Q9BRR3 403 aa21.4■■□□□ 1.02
SMAD6-202ENST00000557916 TRAV38-1A0A0B4J264 116 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 SULT1B1O43704 296 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 GMFBP60983 142 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 KRTAP1-1Q07627 177 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 MLLT11Q13015 90 aaPredicted RBP21.39■■□□□ 1.02
SMAD6-202ENST00000557916 LIPKQ5VXJ0 399 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 CYB5R2Q6BCY4 276 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 SPARTQ8N0X7 666 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 MGLLQ99685 303 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 PATZ1Q9HBE1 687 aaKnown RBP21.39■■□□□ 1.02
SMAD6-202ENST00000557916 NEK6Q9HC98 313 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 TAS2R4Q9NYW5 299 aa21.39■■□□□ 1.02
SMAD6-202ENST00000557916 CSPG4Q6UVK1 2322 aa21.39■■□□□ 1.01
SMAD6-202ENST00000557916 CEACAM18A8MTB9 384 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 SYNGR1O43759 233 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 ALX3O95076 343 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 RAB3AP20336 220 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 MPZP25189 248 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 MTCP1P56278 107 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 TPBGQ13641 420 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 KCNJ8Q15842 424 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 TEX36Q5VZQ5 186 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 LHFPL2Q6ZUX7 228 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 ZNF367Q7RTV3 350 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 MS4A15Q8N5U1 240 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 MSI2Q96DH6 328 aaKnown RBP21.38■■□□□ 1.01
SMAD6-202ENST00000557916 C1orf159Q96HA4 380 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 OR14A2Q96R54 314 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 PKIBQ9C010 78 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 WDR13Q9H1Z4 485 aa21.38■■□□□ 1.01
SMAD6-202ENST00000557916 POLDIP2Q9Y2S7 368 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms