RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 REPIN1Q9BWE0 567 aaKnown RBP8.16□□□□□ -1.1
ACTN1-215ENST00000555616 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
ACTN1-215ENST00000555616 TCF7L1Q9HCS4 588 aa8.16□□□□□ -1.1
ACTN1-215ENST00000555616 NOX4Q9NPH5 578 aa8.16□□□□□ -1.1
ACTN1-215ENST00000555616 LPAR3Q9UBY5 353 aa8.16□□□□□ -1.1
ACTN1-215ENST00000555616 KCNS2Q9ULS6 477 aa8.16□□□□□ -1.1
ACTN1-215ENST00000555616 PIGLQ9Y2B2 252 aa8.16□□□□□ -1.1
ACTN1-215ENST00000555616 V9GYS6 101 aa8.16□□□□□ -1.1
ACTN1-215ENST00000555616 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.15□□□□□ -1.18e-7■■■□□ 14.9
ACTN1-215ENST00000555616 COL6A5A8TX70 2615 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 STAB1Q9NY15 2570 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 TRBV5-7A0A0A0MS05 114 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 TRAV1-2A0A0B4J238 106 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 IGHV1-69-2A0A0G2JMI3 117 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 ZNF816-ZNF321PA0A0X1KG74 233 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-215ENST00000555616 LMX1BO60663 402 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 CD55P08174 381 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 OCMP0CE72 109 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-215ENST00000555616 FAM157CP0CG43 387 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 ZNF182P17025 639 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-215ENST00000555616 KITLGP21583 273 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 ANOS1P23352 680 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 COL8A2P25067 703 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 SERPINB10P48595 397 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 PSG7Q13046 419 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 HLXQ14774 488 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-215ENST00000555616 DGUOKQ16854 277 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 PARP16Q8N5Y8 322 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 CLDND2Q8NHS1 167 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 NDNFQ8TB73 568 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 DYNC2LI1Q8TCX1 351 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 FGGYQ96C11 551 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 CMBLQ96DG6 245 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 TECTBQ96PL2 329 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 DIRC2Q96SL1 478 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 DCSTAMPQ9H295 470 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 POFUT1Q9H488 388 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 NEK6Q9HC98 313 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 SNTG1Q9NSN8 517 aa8.15□□□□□ -1.1
ACTN1-215ENST00000555616 FBN1P35555 2871 aaKnown RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 CHD3Q12873 2000 aaKnown RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 A0A1W2PPK0 400 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 ANKRD30BLA7E2S9 258 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 CD300LBA8K4G0 201 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 PDCD5O14737 125 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 PPIHO43447 177 aaKnown RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 SPRY3O43610 288 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 TIMM8AO60220 97 aaPredicted RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 CDC14BO60729 498 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 CLPXO76031 633 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 TGFAP01135 160 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 IL1AP01583 271 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 FAHP16930 419 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 SRMP19623 302 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 FSTP19883 344 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 RAB3AP20336 220 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 MTNR1BP49286 362 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 CLVS2Q5SYC1 327 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 FAM27D1Q5T7N8 215 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 LINC00299Q6ZSB3 139 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 UTS2BQ765I0 119 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 TPRA1Q86W33 373 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 LINC01356Q8N9X3 169 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 ZFAND2BQ8WV99 257 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 HAVCR1Q96D42 359 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 ADAT3Q96EY9 351 aaPredicted RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 ELMOD3Q96FG2 381 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 PAPOLGQ9BWT3 736 aaKnown RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 CHST5Q9GZS9 411 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 DECR2Q9NUI1 292 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 CCDC59Q9P031 241 aaKnown RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 PURGQ9UJV8 347 aaKnown RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 ZDHHC8Q9ULC8 765 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 FOXJ3Q9UPW0 622 aa8.14□□□□□ -1.11
ACTN1-215ENST00000555616 NOP16Q9Y3C1 178 aaKnown RBP8.14□□□□□ -1.11
ACTN1-215ENST00000555616 MEGF11A6BM72 1044 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 ANKRD61A6NGH8 418 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 ANXA2P2A6NMY6 339 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 IQCF6A8MYZ5 107 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 CLDN25C9JDP6 229 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 WNT9BO14905 357 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 PIN1P1O15428 100 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 MAGEB3O15480 346 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 TPD52L2O43399 206 aaKnown RBP8.13□□□□□ -1.11
ACTN1-215ENST00000555616 SULT1B1O43704 296 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 CDRT1O95170 752 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 CST4P01036 141 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 NRASP01111 189 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 HNF1AP20823 631 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 ACKR3P25106 362 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 SOX6P35712 828 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 PSMD7P51665 324 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 DVL1P1P54792 670 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-215ENST00000555616 LMO4P61968 165 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 CNN3Q15417 329 aaKnown RBP8.13□□□□□ -1.11
ACTN1-215ENST00000555616 HFEQ30201 348 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 FAM120AOSQ5T036 256 aa8.13□□□□□ -1.11
ACTN1-215ENST00000555616 OR2T2Q6IF00 324 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms