RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 OR52N4Q8NGI2 321 aa15.22■□□□□ 0.03
PSEN1-208ENST00000553719 BORCS8Q96FH0 119 aa15.22■□□□□ 0.03
PSEN1-208ENST00000553719 GFI1Q99684 422 aa15.22■□□□□ 0.03
PSEN1-208ENST00000553719 CHCHD6Q9BRQ6 235 aa15.22■□□□□ 0.03
PSEN1-208ENST00000553719 CENPOQ9BU64 300 aa15.22■□□□□ 0.03
PSEN1-208ENST00000553719 BARX1Q9HBU1 254 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-208ENST00000553719 TMEM138Q9NPI0 162 aa15.22■□□□□ 0.03
PSEN1-208ENST00000553719 CCDC168Q8NDH2 2452 aa15.22■□□□□ 0.03
PSEN1-208ENST00000553719 DYSFO75923 2080 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 TRAV1-2A0A0B4J238 106 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 IGHV1-69-2A0A0G2JMI3 117 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 FAM230AA0A1W2PPH8 454 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 TRIM64BA6NI03 449 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 GABARAPO95166 117 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 DAOP14920 347 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 COL8A2P25067 703 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 CALRP27797 417 aaKnown RBP15.21■□□□□ 0.03
PSEN1-208ENST00000553719 CFHR2P36980 270 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 ATP5J2P56134 94 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 ZP1P60852 638 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 WDR82Q6UXN9 313 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 MOGAT3Q86VF5 341 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 ZNF573Q86YE8 665 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 ANKRD13BQ86YJ7 626 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 KRTAP1-3Q8IUG1 177 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 SCCPDHQ8NBX0 429 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 AQP3Q92482 292 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 RDH5Q92781 318 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 PERPQ96FX8 193 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 PKIBQ9C010 78 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 RNF167Q9H6Y7 350 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 SNTG1Q9NSN8 517 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 DCAF16Q9NXF7 216 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 SSR3Q9UNL2 185 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 PPP1R3CQ9UQK1 317 aa15.21■□□□□ 0.03
PSEN1-208ENST00000553719 PRRC2AP48634 2157 aaKnown RBP15.2■□□□□ 0.02
PSEN1-208ENST00000553719 LYNX1G3V0Z9 82 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 J3QT63 122 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 CDIPTO14735 213 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 TPD52L2O43399 206 aaKnown RBP15.2■□□□□ 0.02
PSEN1-208ENST00000553719 AIREO43918 545 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 GRPP07492 148 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 LYNX1P0DP58 116 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 RBMXP38159 391 aaKnown RBP15.2■□□□□ 0.02
PSEN1-208ENST00000553719 HAAOP46952 286 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 ATP1B3P54709 279 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 MTCP1P56278 107 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 BLMHQ13867 455 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 KISS1Q15726 138 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 CTF1Q16619 201 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 DDI2Q5TDH0 399 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 ZNF826PQ6ZT77 177 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 SATL1Q86VE3 508 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 CDH26Q8IXH8 852 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 NKAIN3Q8N8D7 197 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 ZNF420Q8TAQ5 688 aaPredicted RBP15.2■□□□□ 0.02
PSEN1-208ENST00000553719 SPACA5Q96QH8 159 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 NAA50Q9GZZ1 169 aaKnown RBP15.2■□□□□ 0.02
PSEN1-208ENST00000553719 FN3KRPQ9HA64 309 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 TCF7L1Q9HCS4 588 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 MYOZ1Q9NP98 299 aaPredicted RBP15.2■□□□□ 0.02
PSEN1-208ENST00000553719 EXOSC4Q9NPD3 245 aaKnown RBP15.2■□□□□ 0.02
PSEN1-208ENST00000553719 UFSP2Q9NUQ7 469 aa15.2■□□□□ 0.02
PSEN1-208ENST00000553719 LOC100506127A0A0U1RQW1 187 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 CDC14BO60729 498 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 LHBP01229 141 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 MAS1P04201 325 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 HCKP08631 526 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 IL24Q13007 206 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 HAGHLQ6PII5 290 aaPredicted RBP15.19■□□□□ 0.02
PSEN1-208ENST00000553719 ZNF525Q8N782 197 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 OR10Z1Q8NGY1 313 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 METTL17Q9H7H0 456 aaPredicted RBP15.19■□□□□ 0.02
PSEN1-208ENST00000553719 NEK6Q9HC98 313 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 DLL4Q9NR61 685 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 TMEM106BQ9NUM4 274 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 C1orf123Q9NWV4 160 aa15.19■□□□□ 0.02
PSEN1-208ENST00000553719 MEGF11A6BM72 1044 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 IFNL4K9M1U5 179 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 SYNGR1O43759 233 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 RHBDL1O75783 438 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 ACAA1P09110 424 aaPredicted RBP15.18■□□□□ 0.02
PSEN1-208ENST00000553719 CFPP27918 469 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 TGFBR1P36897 503 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 MTNR1BP49286 362 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 RIN1Q13671 783 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 GPR107Q5VW38 600 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 NR2C2APQ86WQ0 139 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 ANGPTL5Q86XS5 388 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 GCSAMQ8N6F7 178 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 KCTD7Q96MP8 289 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 NKX3-1Q99801 234 aaPredicted RBP15.18■□□□□ 0.02
PSEN1-208ENST00000553719 FOXC2Q99958 501 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 CHODLQ9H9P2 273 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 TREM2Q9NZC2 230 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 GSTK1Q9Y2Q3 226 aa15.18■□□□□ 0.02
PSEN1-208ENST00000553719 MAP1AP78559 2803 aaPredicted RBP15.17■□□□□ 0.02
PSEN1-208ENST00000553719 IGKV1-12A0A0C4DH73 117 aa15.17■□□□□ 0.02
PSEN1-208ENST00000553719 A0A0G2JK05 382 aa15.17■□□□□ 0.02
PSEN1-208ENST00000553719 A6NLC8 198 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms