RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 C12orf43Q96C57 262 aaKnown RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 ADAT3Q96EY9 351 aaPredicted RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 GAL3ST1Q99999 423 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 GPR173Q9NS66 373 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 UBAP1Q9NZ09 502 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 ERVK-18Q9QC07 812 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 POLR3KQ9Y2Y1 108 aaPredicted RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 LSM2Q9Y333 95 aaKnown RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 TRAV38-1A0A0B4J264 116 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 ISPDA4D126 451 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 OOEPA6NGQ2 149 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 A6NIN4 97 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 WNT2P09544 360 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 ZNF20P17024 532 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 PRKACBP22694 351 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 GPR50Q13585 617 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 SPHARQ15513 63 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 YIF1BQ5BJH7 314 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 DCDC5Q6ZRR9 648 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 LRRC29Q8WV35 223 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 RGP1Q92546 391 aaPredicted RBP12.12□□□□□ -0.47
DDX54-203ENST00000546869 GHSRQ92847 366 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 RPL3LQ92901 407 aaKnown RBP12.12□□□□□ -0.47
DDX54-203ENST00000546869 SPSB1Q96BD6 273 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 PGLYRP3Q96LB9 341 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 TMEM246Q9BRR3 403 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 PKIBQ9C010 78 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 NARFLQ9H6Q4 476 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 ISYNA1Q9NPH2 558 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 RASL12Q9NYN1 266 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 KAAG1Q9UBP8 84 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 PCDHB10Q9UN67 800 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 DHDHQ9UQ10 334 aa12.12□□□□□ -0.47
DDX54-203ENST00000546869 PPIAL4CA0A0B4J2A2 164 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 IGKV1-9A0A0C4DH69 117 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 TRBV5-5A0A0J9YX44 114 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 hCG_1807616A0A1W2PRN6 198 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 CEACAM18A8MTB9 384 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 FAM157AC9JC47 383 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 TGFAP01135 160 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 ATF1P18846 271 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 RBMXP38159 391 aaKnown RBP12.11□□□□□ -0.47
DDX54-203ENST00000546869 HAAOP46952 286 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 DVL1P1P54792 670 aaPredicted RBP12.11□□□□□ -0.47
DDX54-203ENST00000546869 GABARAPL2P60520 117 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 IL24Q13007 206 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 HNRNPA0Q13151 305 aaKnown RBP12.11□□□□□ -0.47
DDX54-203ENST00000546869 FAM201AQ5SY85 155 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 ATPAF1Q5TC12 328 aaPredicted RBP12.11□□□□□ -0.47
DDX54-203ENST00000546869 FAM166AQ6J272 317 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 ZNF529Q6P280 563 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 SGCDQ92629 289 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 ZCCHC4Q9H5U6 513 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 METTL17Q9H7H0 456 aaPredicted RBP12.11□□□□□ -0.47
DDX54-203ENST00000546869 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 CSPG4Q6UVK1 2322 aa12.11□□□□□ -0.47
DDX54-203ENST00000546869 ZANQ9Y493 2812 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 YLPM1P49750 1951 aaKnown RBP12.1□□□□□ -0.47
DDX54-203ENST00000546869 A8MV72 311 aaPredicted RBP12.1□□□□□ -0.47
DDX54-203ENST00000546869 A8MXK9 166 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 H3BSH0 61 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.1□□□□□ -0.47
DDX54-203ENST00000546869 J3QT63 122 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 GPX5O75715 221 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 ZNF205O95201 554 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 CD2P06729 351 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 MSMBP08118 114 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 RBP2P50120 134 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 ATP1B3P54709 279 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 RPS11P62280 158 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDX54-203ENST00000546869 MICBQ29980 383 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 C11orf91Q3C1V1 193 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 DMRTC1Q5HYR2 192 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 HAGHLQ6PII5 290 aaPredicted RBP12.1□□□□□ -0.47
DDX54-203ENST00000546869 FAM90A1Q86YD7 464 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 OR51F2Q8NH61 342 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 BORCS8Q96FH0 119 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 DNTTIP1Q9H147 329 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 LRCH1Q9Y2L9 728 aa12.1□□□□□ -0.47
DDX54-203ENST00000546869 TEP1Q99973 2627 aaKnown RBP12.09□□□□□ -0.47
DDX54-203ENST00000546869 MTORP42345 2549 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 IGKV1-27A0A075B6S5 117 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 TRAV20A0A0B4J274 112 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 SULT1B1O43704 296 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 FOXH1O75593 365 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 RHBDL1O75783 438 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 OCM2P0CE71 109 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 PGA5P0DJD9 388 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 EGR1P18146 543 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 CELP19835 753 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 PCMT1P22061 227 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 AZGP1P25311 298 aaKnown RBP12.09□□□□□ -0.47
DDX54-203ENST00000546869 NPY4RP50391 375 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 ERVK11-1P61568 191 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 DOC2BQ14184 412 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 Q499Y3 187 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 SFRP4Q6FHJ7 346 aaPredicted RBP12.09□□□□□ -0.47
DDX54-203ENST00000546869 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms