RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 CNTD2Q9H8S5 307 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 NOX4Q9NPH5 578 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 RASL12Q9NYN1 266 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 NLKQ9UBE8 527 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 DOCK11Q5JSL3 2073 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 IGHV3OR16-10A0A075B7F0 116 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 A0A1B0GTI1 187 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 A0A1B0GVI7 797 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 A0A1B0GW55 424 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 J3QT63 122 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 EBAG9O00559 213 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 SFTPBP07988 381 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DUX4L2P0CJ85 424 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DUX4L3P0CJ86 424 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DUX4L4P0CJ87 422 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DUX4L5P0CJ88 424 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DUX4L6P0CJ89 424 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DUX4L7P0CJ90 424 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 HKR1P10072 659 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 AMY2BP19961 511 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 GLRA1P23415 457 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 CAV3P56539 151 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 SNRPGP62308 76 aaKnown RBP9.55□□□□□ -0.88
RTN3-209ENST00000538995 ACTC1P68032 377 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 ACTA1P68133 377 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 IKZF1Q13422 519 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 CDONQ4KMG0 1287 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 MEDAGQ5VYS4 303 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DUX4L9Q6RFH8 374 aaPredicted RBP9.55□□□□□ -0.88
RTN3-209ENST00000538995 PLEKHG7Q6ZR37 379 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 MOB3CQ70IA8 216 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 FAM220AQ7Z4H9 259 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 CATSPERDQ86XM0 798 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 CMTM4Q8IZR5 234 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 OR10H4Q8NGA5 316 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 OR14K1Q8NGZ2 314 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 GATAD2BQ8WXI9 593 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 PPP1R14AQ96A00 147 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 SEH1LQ96EE3 360 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 GAFA1Q96PS6 74 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 TBX5Q99593 518 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DCTN5Q9BTE1 182 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 DUX4Q9UBX2 424 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 SLC22A13Q9Y226 551 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 POLDIP2Q9Y2S7 368 aa9.55□□□□□ -0.88
RTN3-209ENST00000538995 NBEAL1Q6ZS30 2694 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 CENPVL3A0A0U1RRI6 287 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 PQLC2LA1A4F0 135 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 SNTNA6NMZ2 147 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 OR2AT4A6NND4 320 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 MAGEB4O15481 346 aaPredicted RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 NOS1APO75052 506 aaPredicted RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 RHBDL1O75783 438 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 RPP14O95059 124 aaKnown RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 ACAA1P09110 424 aaPredicted RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 UBCP0CG48 685 aaKnown RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 MPZP25189 248 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 CFPP27918 469 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 ISL1P61371 349 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 ELF3P78545 371 aaPredicted RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 FOXL1Q12952 345 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 SLC9A3R2Q15599 337 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 OCLNQ16625 522 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 SMIM21Q3B7S5 101 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 HAGHLQ6PII5 290 aaPredicted RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 METAP1DQ6UB28 335 aaPredicted RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 BRD3OSQ6XYD6 125 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 KCTD20Q7Z5Y7 419 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 CBR4Q8N4T8 237 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 TMEM86BQ8N661 226 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 POC1AQ8NBT0 407 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 RORBQ92753 470 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 TMIGD2Q96BF3 282 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 C10orf35Q96D05 121 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 C9orf16Q9BUW7 83 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 PLEKHA1Q9HB21 404 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 SNTG1Q9NSN8 517 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 SLC25A10Q9UBX3 287 aaPredicted RBP9.54□□□□□ -0.88
RTN3-209ENST00000538995 ZNF222Q9UK12 451 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 PCDHGB1Q9Y5G3 927 aa9.54□□□□□ -0.88
RTN3-209ENST00000538995 IGKV1D-17A0A075B6S4 117 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 TRBV23-1A0A0A0MS06 115 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 IGHV1-69DA0A0B4J2H0 117 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 ANKRD61A6NGH8 418 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 SYT7O43581 403 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 GATBO75879 557 aaKnown RBP9.53□□□□□ -0.88
RTN3-209ENST00000538995 APOL3O95236 402 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 IGHV1-69P01742 117 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 PGA5P0DJD9 388 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 PSG2P11465 335 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 HAAOP46952 286 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 GMFBP60983 142 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 ARF6P62330 175 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 DGUOKQ16854 277 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 DEFB112Q30KQ8 113 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 AWAT1Q58HT5 328 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 C1orf122Q6ZSJ8 110 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 OR5T2Q8NGG2 359 aa9.53□□□□□ -0.88
RTN3-209ENST00000538995 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms