RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SHISA5Q8N114 240 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 MUC15Q8N387 334 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 SLC26A10Q8NG04 563 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 OR9Q2Q8NGE9 314 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 OTOSQ8NHW6 89 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 RBPMSQ93062 196 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 WFIKKN1Q96NZ8 548 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 PDCD10Q9BUL8 212 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 HINT2Q9BX68 163 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 NMNAT2Q9BZQ4 307 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 NUAK2Q9H093 628 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CXXC4Q9H2H0 198 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 UBTD1Q9HAC8 227 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 AKIP1Q9NQ31 210 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 TMEM100Q9NV29 134 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CRIM1Q9NZV1 1036 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 MRPL15Q9P015 296 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 GDF2Q9UK05 429 aaPredicted RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ANKRD11Q6UB99 2663 aaPredicted RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 IGF2RP11717 2491 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 IGLV1-36A0A0B4J1U3 117 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 TRAV34A0A0B4J273 112 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF593O00488 134 aaPredicted RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 SEMA7AO75326 666 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ANXA2P07355 339 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 HIST1H1CP16403 213 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 KITLGP21583 273 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CEBPDP49716 269 aaPredicted RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 UCP2P55851 309 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 AP3S2P59780 193 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 HIST1H3AP68431 136 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ROM1Q03395 351 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 LTBQ06643 244 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 FOXF2Q12947 444 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 GAGE1Q13065 139 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 OR8G1Q15617 311 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 TMEM30BQ3MIR4 351 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 MESTQ5EB52 335 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 HIST2H3PS2Q5TEC6 136 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CD276Q5ZPR3 534 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF322Q6U7Q0 402 aaPredicted RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 HIST2H3AQ71DI3 136 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 BIVMQ86UB2 503 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 COMMD2Q86X83 199 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF573Q86YE8 665 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 TCEANCQ8N8B7 351 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 YIPF7Q8N8F6 280 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 SDR9C7Q8NEX9 313 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 OR1J1Q8NGS3 322 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 OR8S1Q8NH09 359 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 THEM6Q8WUY1 208 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 RNF133Q8WVZ7 376 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 SPSB1Q96BD6 273 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 SLAMF6Q96DU3 332 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 FAM210BQ96KR6 192 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ABHD1Q96SE0 405 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 TMEM208Q9BTX3 173 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 EMC6Q9BV81 110 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CCDC90BQ9GZT6 254 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 SMURF1Q9HCE7 757 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 MRPS18AQ9NVS2 196 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 RASL12Q9NYN1 266 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 NAGKQ9UJ70 344 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 HHLA2Q9UM44 414 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 SSR3Q9UNL2 185 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 GSTK1Q9Y2Q3 226 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 EPG5Q9HCE0 2579 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 DOCK10Q96BY6 2186 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CNTRLQ7Z7A1 2325 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 IGHV2OR16-5A0A0B4J2B6 119 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 KRTAP4-8A0A0G2JLE6 195 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF816-ZNF321PA0A0X1KG74 233 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CBY3A6NI87 242 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 LRRN3E7EW58 273 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 DIRAS1O95057 198 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 IGHV3-13P01766 116 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CD55P08174 381 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 UBBP0CG47 229 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 STAG3L2P0CL84 134 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CD1BP29016 333 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 NPY4RP50391 375 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 MMP16P51512 607 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ATP1B3P54709 279 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 FGL1Q08830 312 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 IKZF1Q13422 519 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 IRF3Q14653 427 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 RAB39AQ14964 217 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 USF2Q15853 346 aaPredicted RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 PCK2Q16822 640 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF181Q2M3W8 571 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF684Q5T5D7 378 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 PRAMEF5Q5TYX0 476 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 HACD4Q5VWC8 232 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 PRAMEF6Q5VXH4 476 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF787Q6DD87 383 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 RPL22L1Q6P5R6 122 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 MKXQ8IYA7 352 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 C10orf111Q8N326 155 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 C12orf45Q8N5I9 185 aaPredicted RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 KBTBD8Q8NFY9 601 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms