RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 LAMTOR1Q6IAA8 161 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 DRAM2Q6UX65 266 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OVCH2Q7RTZ1 564 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 NAA40Q86UY6 237 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OR52N4Q8NGI2 321 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 SOSTQ9BQB4 213 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 IGHV1OR21-1A0A087WYE8 117 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 C9orf170A2RU37 121 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 RAB27BO00194 218 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 PLPP3O14495 311 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 MPC2O95563 127 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OR2B11Q5JQS5 317 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 IP6K3Q96PC2 410 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 OSGIN2Q9Y236 505 aa12.32□□□□□ -0.44
SYNPO-205ENST00000522122 CKAP5Q14008 2032 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 PDGFBP01127 241 aaPredicted RBP12.31□□□□□ -0.44
SYNPO-205ENST00000522122 C1orf53Q5VUE5 145 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 SSX9Q7RTT3 188 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 SPINT1O43278 529 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 DUS4LO95620 317 aaKnown RBP12.31□□□□□ -0.44
SYNPO-205ENST00000522122 IAPPP10997 89 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 CCL7P80098 99 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 RBPJQ06330 500 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF787Q6DD87 383 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 RFLNBQ8N5W9 214 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 CHD5Q8TDI0 1954 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 SFT2D2O95562 160 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 RECKO95980 971 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 PJVKQ0ZLH3 352 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 Q7L0L9 218 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 TECTBQ96PL2 329 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 NTMQ9P121 344 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 SHISA3A0PJX4 238 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 KLF4O43474 513 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 TNFSF14O43557 240 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
SYNPO-205ENST00000522122 CXCL2P19875 107 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 CD226Q15762 336 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 PDZD11Q5EBL8 140 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 ZAR1Q86SH2 424 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF439Q8NDP4 499 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 CADM4Q8NFZ8 388 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 SARGQ9BW04 601 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 CNTD2Q9H8S5 307 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 FRRS1LQ9P0K9 344 aa12.31□□□□□ -0.44
SYNPO-205ENST00000522122 RCL1Q9Y2P8 373 aaKnown RBP12.31□□□□□ -0.44
SYNPO-205ENST00000522122 GPR31O00270 319 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 DHRS3O75911 302 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 NAT1P18440 290 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 ATG4DQ86TL0 474 aaPredicted RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 COMMD1Q8N668 190 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 OR11H4Q8NGC9 324 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 EXTL1Q92935 676 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 AKR1E2Q96JD6 320 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 CABLES2Q9BTV7 478 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 SSUH2Q9Y2M2 353 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 CEP290O15078 2479 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 CST7O76096 145 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 MPZL1O95297 269 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 GLRA1P23415 457 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 STPG2Q8N412 459 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 OR11G2Q8NGC1 345 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 GNRHR2Q96P88 292 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 PSENENQ9NZ42 101 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 C4orf51C9J302 202 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 CYR61O00622 381 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 TGOLN2O43493 480 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 SEMA7AO75326 666 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 RPS4Y1P22090 263 aaKnown RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 RFC3P40938 356 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 ENDOGQ14249 297 aaKnown RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 CEBPEQ15744 281 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 ETFDHQ16134 617 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 C1QL3Q5VWW1 255 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 RPUSD4Q96CM3 377 aaKnown RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 C12orf57Q99622 126 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF230Q9UIE0 474 aaPredicted RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 MFSD2BA6NFX1 497 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 OR4C45A6NMZ5 311 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 MGST1P10620 155 aaKnown RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 PPIAP62937 165 aaKnown RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 RAB32Q13637 225 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 H1FXQ92522 213 aaKnown RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 MCHR2Q969V1 340 aa12.3□□□□□ -0.44
SYNPO-205ENST00000522122 APOBEC3DQ96AK3 386 aaPredicted RBP12.3□□□□□ -0.44
SYNPO-205ENST00000522122 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 E9PQ18 207 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 FAM157BP0CG42 384 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 RAB35Q15286 201 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 C16orf47Q6ZP98 133 aaPredicted RBP12.29□□□□□ -0.44
SYNPO-205ENST00000522122 OR4F5Q8NH21 305 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 OR4F4Q96R69 305 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 SMIM7Q9BQ49 75 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 LOXL2Q9Y4K0 774 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CCDC88CQ9P219 2028 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 H3BP45 60 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 MBP02144 154 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms