RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 EXOSC2Q13868 293 aaKnown RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 ICAM4Q14773 271 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 KPNB1Q14974 876 aaKnown RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 SNCBQ16143 134 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 TATDN3Q17R31 274 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 MICAQ29983 383 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 CEACAM16Q2WEN9 425 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 CLEC12AQ5QGZ9 265 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 SMARCD3Q6STE5 483 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 CD164L2Q6UWJ8 174 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 C19orf35Q6ZS72 473 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ASRGL1Q7L266 308 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 HDDC2Q7Z4H3 204 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 CATSPERDQ86XM0 798 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 C20orf196Q8IYI0 205 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 GABRG1Q8N1C3 465 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 LINC00471Q8N535 108 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ZNF433Q8N7K0 673 aaPredicted RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 CYB561A3Q8NBI2 242 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 AQP11Q8NBQ7 271 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 OR9Q2Q8NGE9 314 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 OR51L1Q8NGJ5 315 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 OR52N5Q8NH56 324 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 OR6X1Q8NH79 312 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 FANK1Q8TC84 345 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ERGIC1Q969X5 290 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 PPP1R14BQ96C90 147 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 PIK3IP1Q96FE7 263 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 SLC25A44Q96H78 314 aaPredicted RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 ZNF570Q96NI8 536 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ALKBH3Q96Q83 286 aaPredicted RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 C20orf24Q9BUV8 137 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 POLDIP3Q9BY77 421 aaKnown RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 ULBP2Q9BZM5 246 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 RAB1BQ9H0U4 201 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 TXNIPQ9H3M7 391 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 RERGLQ9H628 205 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ESRP2Q9H6T0 727 aaKnown RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 PPP1R3EQ9H7J1 279 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ZNF556Q9HAH1 456 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 POLE4Q9NR33 117 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 TAS2R16Q9NYV7 291 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 GLTPQ9NZD2 209 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 WDR83OSQ9Y284 106 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 EXOGQ9Y2C4 368 aaKnown RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 TMED3Q9Y3Q3 217 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 AP4S1Q9Y587 144 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 IER3IP1Q9Y5U9 82 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ASH1LQ9NR48 2969 aaKnown RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 MED12Q93074 2177 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 EXPH5Q8NEV8 1989 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SPTAN1Q13813 2472 aaKnown RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 TRGV11A0A075B6L2 103 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 LOC390937A0A1W2PQ73 354 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 TCRBV3S1A0A5B6 114 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 RAB19A4D1S5 217 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 A6NIZ1 184 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 OR5H1A6NKK0 313 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SERPINE3A8MV23 424 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 ANKRD65E5RJM6 399 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 H3BN98 237 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SMLR1H3BR10 107 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 H7C1C5 153 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 M0R1B8 84 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SOCS2O14508 198 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 RS1O15537 224 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 FAM20BO75063 409 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 TRMUO75648 421 aaKnown RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 ZNF432O94892 652 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 NDUFB2O95178 105 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 PPP1R3DO95685 299 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 PRF1P14222 555 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 PSMB1P20618 241 aaKnown RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 CCNOP22674 350 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 FASP25445 335 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 NAA10P41227 235 aaPredicted RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 MAGEA2P43356 314 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 ZNF83P51522 516 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 RAP1BP61224 184 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 LCN6P62502 163 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 RAP1AP62834 184 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 TUBA4AP68366 448 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 CD47Q08722 323 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 TSPAN31Q12999 210 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 TAB1Q15750 504 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 USF2Q15853 346 aaPredicted RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 ETFDHQ16134 617 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 GABRA6Q16445 453 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SGCAQ16586 387 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 RFX4Q33E94 735 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 LINC01620Q4KN68 170 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 TIMM23BQ5SRD1 257 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 C1orf94Q6P1W5 598 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 MYO7BQ6PIF6 2116 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 ASCL4Q6XD76 172 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 DPY19L2P2Q6ZN68 376 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 YTHDF3Q7Z739 585 aaKnown RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 AMIGO2Q86SJ2 522 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 P2RY8Q86VZ1 359 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms