RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PLXNA2O75051 1894 aa1.86□□□□□ -2.11
LINC01088-211ENST00000515597 RYR2Q92736 4967 aa1.86□□□□□ -2.11
LINC01088-211ENST00000515597 MYH7P12883 1935 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 DENND4CQ5VZ89 1909 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 SCN8AQ9UQD0 1980 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 BAZ2BQ9UIF8 2168 aaKnown RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 LRRIQ3A6PVS8 624 aaPredicted RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 CDC40O60508 579 aaKnown RBP eCLIP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 CDRT1O95170 752 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 SERPINA3P01011 423 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 CST1P01037 141 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 CD74P04233 296 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 IGKV4-1P06312 121 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 ZNF43P17038 809 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 HMGA1P17096 107 aaKnown RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 IL1RNP18510 177 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 HNRNPH3P31942 346 aaKnown RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 HCAR3P49019 387 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 ARPP19P56211 112 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 BST1Q10588 318 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 SAXO2Q658L1 398 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 TWF2Q6IBS0 349 aaKnown RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 ZFP1Q6P2D0 407 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 RNASEKQ6P5S7 137 aaKnown RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 NIPA1Q7RTP0 329 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 MMAAQ8IVH4 418 aaKnown RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 OR2A1Q8NGT9 310 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 CPB2Q96IY4 423 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 TBL1YQ9BQ87 522 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 TIMM29Q9BSF4 260 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 FGF20Q9NP95 211 aaPredicted RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 UXTQ9UBK9 157 aaPredicted RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 HERC2O95714 4834 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 NSD1Q96L73 2696 aaPredicted RBP1.85□□□□□ -2.11
LINC01088-211ENST00000515597 NOTCH1P46531 2555 aa1.85□□□□□ -2.11
LINC01088-211ENST00000515597 PRRC2CQ9Y520 2896 aaKnown RBP1.84□□□□□ -2.11
LINC01088-211ENST00000515597 H0Y8G0 127 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 UBXN8O00124 270 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 AIM2O14862 343 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 CLPXO76031 633 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 TNFSF15O95150 251 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 IGHDP01880 384 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 SERPINA5P05154 406 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 CD3GP09693 182 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 ZNF688P0C7X2 276 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 ZNF24P17028 368 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 ATF6P18850 670 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 DCKP27707 260 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 GABRR2P28476 465 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 GPX4P36969 197 aaPredicted RBP1.84□□□□□ -2.11
LINC01088-211ENST00000515597 NAA10P41227 235 aaPredicted RBP1.84□□□□□ -2.11
LINC01088-211ENST00000515597 NSG1P42857 185 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 TMED10P49755 219 aaKnown RBP1.84□□□□□ -2.11
LINC01088-211ENST00000515597 SULT1E1P49888 294 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 P2RX1P51575 399 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 DDX39BQ13838 428 aaKnown RBP1.84□□□□□ -2.11
LINC01088-211ENST00000515597 OR7A5Q15622 319 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 AVPI1Q5T686 147 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 FAM43BQ6ZT52 329 aaPredicted RBP1.84□□□□□ -2.11
LINC01088-211ENST00000515597 CDKL3Q8IVW4 592 aaPredicted RBP1.84□□□□□ -2.11
LINC01088-211ENST00000515597 WDFY1Q8IWB7 410 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 CMTM8Q8IZV2 173 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 FBXL13Q8NEE6 735 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 OR13G1Q8NGZ3 307 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 KCNG3Q8TAE7 436 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 FBXO32Q969P5 355 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 PTX4Q96A99 478 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 HSD17B10Q99714 261 aaKnown RBP1.84□□□□□ -2.11
LINC01088-211ENST00000515597 MICU1Q9BPX6 476 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 GCNT4Q9P109 453 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 TMCC3Q9ULS5 477 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 RYR1P21817 5038 aa1.84□□□□□ -2.11
LINC01088-211ENST00000515597 RP1L1Q8IWN7 2480 aaPredicted RBP1.84□□□□□ -2.12
LINC01088-211ENST00000515597 PKDREJQ9NTG1 2253 aa1.84□□□□□ -2.12
LINC01088-211ENST00000515597 MXRA5Q9NR99 2828 aa1.84□□□□□ -2.12
LINC01088-211ENST00000515597 TLN2Q9Y4G6 2542 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 TRAV19A0A0A6YYK7 116 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 CENPVL3A0A0U1RRI6 287 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 LYRM9A8MSI8 78 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 RAB29O14966 203 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 ZBTB5O15062 677 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 NUPL2O15504 423 aaKnown RBP1.83□□□□□ -2.12
LINC01088-211ENST00000515597 SOCS1O15524 211 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 CHST10O43529 356 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 KLHL41O60662 606 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 RDH16O75452 317 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 PABPC4LP0CB38 370 aaKnown RBP1.83□□□□□ -2.12
LINC01088-211ENST00000515597 TROVE2P10155 538 aaKnown RBP eCLIP1.83□□□□□ -2.12
LINC01088-211ENST00000515597 SFTPCP11686 197 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 ACTR3P61158 418 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 RPL10AP62906 217 aaKnown RBP1.83□□□□□ -2.12
LINC01088-211ENST00000515597 KDSRQ06136 332 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 SDHAF4Q5VUM1 108 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 RAET1LQ5VY80 246 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 TMEM205Q6UW68 189 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 UNQ9165/PRO28630Q6UXU0 137 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 CERS6Q6ZMG9 384 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 SLC16A13Q7RTY0 426 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 LRRC52Q8N7C0 313 aa1.83□□□□□ -2.12
LINC01088-211ENST00000515597 OR56B2PQ8NGI1 322 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms