RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 GPR139Q6DWJ6 353 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 SLC25A47Q6Q0C1 308 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 ETV3LQ6ZN32 361 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 BCDIN3DQ7Z5W3 292 aaKnown RBP7.35□□□□□ -1.23
NUP54-211ENST00000512151 ALDH16A1Q8IZ83 802 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 CYB561A3Q8NBI2 242 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 BHLHE23Q8NDY6 225 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 OR5AU1Q8NGC0 362 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 C8orf46Q8TAG6 207 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 CYGBQ8WWM9 190 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 DPF1Q92782 380 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 TSSK2Q96PF2 358 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 PITX2Q99697 317 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 MED20Q9H944 212 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 RAB18Q9NP72 206 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 CMC2Q9NRP2 79 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 TVP23BQ9NYZ1 205 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 VSX1Q9NZR4 365 aaPredicted RBP7.35□□□□□ -1.23
NUP54-211ENST00000512151 NDRG4Q9ULP0 352 aaKnown RBP7.35□□□□□ -1.23
NUP54-211ENST00000512151 BAIAP2Q9UQB8 552 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 TIMM10BQ9Y5J6 103 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 COMMD3-BMI1R4GMX3 469 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 PRSS37A4D1T9 235 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 FAM183AA6NL82 134 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 SYNGR1O43759 233 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 PRKYO43930 277 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 ECDO95905 644 aaPredicted RBP7.34□□□□□ -1.23
NUP54-211ENST00000512151 CLUP10909 449 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 SNRPBP14678 240 aaKnown RBP7.34□□□□□ -1.23
NUP54-211ENST00000512151 ATP6V1B1P15313 513 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 GABRB1P18505 474 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 TUBG1P23258 451 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 NOS3P29474 1203 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 UBE2E1P51965 193 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 DGCR2P98153 550 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 TTC23Q5W5X9 447 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 FBXW12Q6X9E4 464 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 FAM90A1Q86YD7 464 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 MRPL41Q8IXM3 137 aaKnown RBP7.34□□□□□ -1.23
NUP54-211ENST00000512151 TCEANCQ8N8B7 351 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 OR11L1Q8NGX0 322 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 ALG12Q9BV10 488 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 NMNAT2Q9BZQ4 307 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 NDEL1Q9GZM8 345 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 NUAK2Q9H093 628 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 MEGF9Q9H1U4 602 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 TUBG2Q9NRH3 451 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 ORC6Q9Y5N6 252 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 GMPPBQ9Y5P6 360 aa7.34□□□□□ -1.23
NUP54-211ENST00000512151 IGHV3OR15-7A0A075B7D8 119 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 TCRBV4S1A1TA0A5B7 111 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 A6NIZ1 184 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 CENPBD1B2RD01 187 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 HMGN1P05114 100 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 CTLA4P16410 223 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 GSTT1P30711 240 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 RAP1BP61224 184 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 RAP1AP62834 184 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 IL18R1Q13478 541 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 OR8B8Q15620 311 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 SNAPC1Q16533 368 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 ZNF691Q5VV52 312 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 OTPQ5XKR4 325 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 LAIR2Q6ISS4 152 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 CPOQ8IVL8 374 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 SBSPONQ8IVN8 264 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 ENTHD1Q8IYW4 607 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 OR6V1Q8N148 313 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 BBS1Q8NFJ9 593 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 OR51G2Q8NGK0 314 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 OR9Q1Q8NGQ5 310 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 FAM81AQ8TBF8 368 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 MYDGFQ969H8 173 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 ZNF582Q96NG8 517 aaPredicted RBP7.33□□□□□ -1.24
NUP54-211ENST00000512151 IL4I1Q96RQ9 567 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 SYT4Q9H2B2 425 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 SRA1Q9HD15 236 aaKnown RBP7.33□□□□□ -1.24
NUP54-211ENST00000512151 RPRD1BQ9NQG5 326 aaKnown RBP7.33□□□□□ -1.24
NUP54-211ENST00000512151 PTTG2Q9NZH5 202 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 RNF7Q9UBF6 113 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 ENOPH1Q9UHY7 261 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 B9D1Q9UPM9 204 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 CEPT1Q9Y6K0 416 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 IGLV1-36A0A0B4J1U3 117 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 OOEPA6NGQ2 149 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 IQCF6A8MYZ5 107 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 XKRYO14609 159 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 DOK2O60496 412 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 SLC16A7O60669 478 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 GYPBP06028 91 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 DBHP09172 617 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 COX5BP10606 129 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 SLC2A5P22732 501 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 PYCR1P32322 319 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 CD200P41217 278 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 RGS6P49758 472 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 ISL1P61371 349 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 BLCAPP62952 87 aa7.33□□□□□ -1.24
NUP54-211ENST00000512151 CD47Q08722 323 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms