RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 NKX6-3A6NJ46 265 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 ACOD1A6NK06 481 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 DVL1O14640 695 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 RGS10O43665 173 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 NDUFB3O43676 98 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 CRYBA1P05813 215 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 RPSAP08865 295 aaKnown RBP8.65□□□□□ -1.02
NR1I3-222ENST00000506018 OR2T7P0C7T2 308 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 SLC2A5P22732 501 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 CFHR2P36980 270 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 MAP2K3P46734 347 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 ZNF91Q05481 1191 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 SLC9A3R2Q15599 337 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 SMN1Q16637 294 aaKnown RBP8.65□□□□□ -1.02
NR1I3-222ENST00000506018 ZNF829Q3KNS6 432 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-222ENST00000506018 LRRC10Q5BKY1 277 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 PRSS45Q7RTY3 260 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 COMMD2Q86X83 199 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 FAM90A1Q86YD7 464 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 EGFL6Q8IUX8 553 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 ZDHHC23Q8IYP9 409 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 CMTM4Q8IZR5 234 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 OR10Z1Q8NGY1 313 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 OR2T27Q8NH04 317 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 ASB17Q8WXJ9 295 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 ST8SIA4Q92187 359 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 PIGCQ92535 297 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 FAM71F1Q96KD3 344 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-222ENST00000506018 DMRTB1Q96MA1 342 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 WDFY2Q96P53 400 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 CCDC90BQ9GZT6 254 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 DNTTIP1Q9H147 329 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 DUSP21Q9H596 190 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 ZNF696Q9H7X3 374 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 AMBNQ9NP70 447 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 CTSZQ9UBR2 303 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 RHBDD3Q9Y3P4 386 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 LRP12Q9Y561 859 aa8.65□□□□□ -1.02
NR1I3-222ENST00000506018 IGHV3OR15-7A0A075B7D8 119 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 A0A1B0GVI7 797 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF850A8MQ14 1090 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 C22orf46C9J442 243 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 CDIPTO14735 213 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 XPNPEP2O43895 674 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF254O75437 659 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 MTRF1O75570 445 aaKnown RBP8.64□□□□□ -1.03
NR1I3-222ENST00000506018 CST4P01036 141 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ATP6V1B1P15313 513 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ALOX5APP20292 161 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ANOS1P23352 680 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 DCTDP32321 178 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 RIDAP52758 137 aaKnown RBP8.64□□□□□ -1.03
NR1I3-222ENST00000506018 SLC35A2P78381 396 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ST3GAL4Q11206 333 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 PRDX4Q13162 271 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 C16orf87Q6PH81 154 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 WDR82Q6UXN9 313 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 BRD3OSQ6XYD6 125 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 AHSA2Q719I0 299 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 BTN2A1Q7KYR7 527 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 PRSS48Q7RTY5 328 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ACBD7Q8N6N7 88 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 SCCPDHQ8NBX0 429 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 BBS1Q8NFJ9 593 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 TSPAN14Q8NG11 270 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 OR51G2Q8NGK0 314 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 GGHQ92820 318 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ITPKCQ96DU7 683 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 RNF170Q96K19 258 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF48Q96MX3 618 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-222ENST00000506018 AMELYQ99218 206 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF747Q9BV97 191 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 CNTD2Q9H8S5 307 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 FGF20Q9NP95 211 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-222ENST00000506018 AASSQ9UDR5 926 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 SCOCQ9UIL1 159 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 IKZF2Q9UKS7 526 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 ERGIC3Q9Y282 383 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 EXOGQ9Y2C4 368 aaKnown RBP8.64□□□□□ -1.03
NR1I3-222ENST00000506018 CAB39Q9Y376 341 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-222ENST00000506018 EXOSC1Q9Y3B2 195 aaKnown RBP8.64□□□□□ -1.03
NR1I3-222ENST00000506018 PCDHGB5Q9Y5G0 923 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 KPTNQ9Y664 436 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 NBEAL1Q6ZS30 2694 aa8.64□□□□□ -1.03
NR1I3-222ENST00000506018 A0A0U1RQV5 110 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF816-ZNF321PA0A0X1KG74 233 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 A0A1B0GUS0 222 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 TMEM269A0A1B0GVZ9 245 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 DAPL1A0PJW8 107 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 CCDC182A6NF36 153 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF670-ZNF695F2Z2N8 137 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 TNFRSF13BO14836 293 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-222ENST00000506018 HOXA3O43365 443 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-222ENST00000506018 CDK1P06493 297 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 ACTA2P62736 377 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 ACTG2P63267 376 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 WDR38Q5JTN6 314 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms