RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ZNF154Q13106 437 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 MPPED2Q15777 294 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 SPRNQ5BIV9 151 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 YIF1BQ5BJH7 314 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 RNLSQ5VYX0 342 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 HAGHLQ6PII5 290 aaPredicted RBP6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 LHFPL2Q6ZUX7 228 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 PRSS48Q7RTY5 328 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 SLC36A1Q7Z2H8 476 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 LRRC28Q86X40 367 aaPredicted RBP6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 MKXQ8IYA7 352 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 NANOGP1Q8N7R0 232 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 SCCPDHQ8NBX0 429 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 RPL3LQ92901 407 aaKnown RBP6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 SPSB1Q96BD6 273 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 TMIGD2Q96BF3 282 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 S100A13Q99584 98 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 CDCA4Q9BXL8 241 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 YTHDF1Q9BYJ9 559 aaKnown RBP6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 ZCCHC4Q9H5U6 513 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 GLS2Q9UI32 602 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.85□□□□□ -1.311e-6■■■□□ 16.5
TM4SF1-204ENST00000493348 WNK2Q9Y3S1 2297 aa6.85□□□□□ -1.31
TM4SF1-204ENST00000493348 TLN2Q9Y4G6 2542 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 HIVEP2P31629 2446 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 A8MV72 311 aaPredicted RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 E9PI62 339 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 TRAPPC2LH3BP13 241 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 J3QT63 122 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 AKR7A2O43488 359 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 SULT1B1O43704 296 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 MRPS14O60783 128 aaKnown RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 FOXH1O75593 365 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 NXPH2O95156 264 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 PTBP3O95758 552 aaKnown RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 LY6G6DO95868 133 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 PLATP00750 562 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 IGHV2-5P01817 119 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 MT-ND2P03891 347 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 IGHV4-31P0DP07 118 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 MUC1P15941 1255 aaPredicted RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 ZNF16P17020 682 aaPredicted RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 ATF1P18846 271 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 RAB3AP20336 220 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 CRHBPP24387 322 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 AZGP1P25311 298 aaKnown RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 CD80P33681 288 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 THBS2P35442 1172 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 SOX2P48431 317 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 POU3F4P49335 361 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 GNB2P62879 340 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 SLC35A2P78381 396 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 ZMYND11Q15326 602 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 SPHARQ15513 63 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 SMIM21Q3B7S5 101 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 SFRP4Q6FHJ7 346 aaPredicted RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 WDR82Q6UXN9 313 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 DCDC5Q6ZRR9 648 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 ZNF826PQ6ZT77 177 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 UTS2BQ765I0 119 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 SATL1Q86VE3 508 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 TEX29Q8N6K0 151 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 ZFP41Q8N8Y5 198 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 PNLDC1Q8NA58 520 aaKnown RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 OR13C9Q8NGT0 318 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 HPSE2Q8WWQ2 592 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 GHSRQ92847 366 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 TMEM106AQ96A25 262 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 NEIL1Q96FI4 390 aaPredicted RBP6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 OPALINQ96PE5 141 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 LPAR2Q9HBW0 351 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 VCX3AQ9NNX9 186 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 FKBP14Q9NWM8 211 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 RASL12Q9NYN1 266 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 OR5V1Q9UGF6 321 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 LRCH1Q9Y2L9 728 aa6.84□□□□□ -1.31
TM4SF1-204ENST00000493348 CSPG4Q6UVK1 2322 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 ZNF469Q96JG9 3925 aaPredicted RBP6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 TRAV20A0A0B4J274 112 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 A0A0G2JMP0 313 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 A0A0X1KG70 313 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 CEACAM18A8MTB9 384 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 OGG1O15527 345 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 ADAM20O43506 726 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 LMX1BO60663 402 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 INMTO95050 263 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 GYPAP02724 150 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 MSMBP08118 114 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 PMELP40967 661 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 GABRA2P47869 451 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 PITPNBP48739 271 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 NPY4RP50391 375 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 CAPZA1P52907 286 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 TRAM1Q15629 374 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 UBE2V2Q15819 145 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 ZNF404Q494X3 552 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 Q499Y3 187 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 DMRTC1Q5HYR2 192 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 CD276Q5ZPR3 534 aa6.83□□□□□ -1.32
TM4SF1-204ENST00000493348 TMEM42Q69YG0 159 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms