RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZNF133P52736 654 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-216ENST00000486741 RAB5BP61020 215 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 OR2T2Q6IF00 324 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 DRAM2Q6UX65 266 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 UNQ9370/PRO34162Q6UXP9 181 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 CXorf67Q86X51 503 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-216ENST00000486741 LRRC75AQ8NAA5 344 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 NARFLQ9H6Q4 476 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 NECAP2Q9NVZ3 263 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 B3GNT2Q9NY97 397 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 TRAF3IP2O43734 574 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-216ENST00000486741 COX6A1P12074 109 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 M6PRP20645 277 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 THBS4P35443 961 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 RAB35Q15286 201 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 PAN3Q58A45 887 aaKnown RBP11.66□□□□□ -0.54
HMGN1-216ENST00000486741 TOR2AQ5JU69 321 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 RTL6Q6ICC9 239 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 IL17BQ9UHF5 180 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 LRRK1Q38SD2 2015 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 SIRPB1O00241 398 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 WISP1O95388 367 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 PGA4P0DJD7 388 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 PGA3P0DJD8 388 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 OSR2Q8N2R0 312 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 CHRNA10Q9GZZ6 450 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 GHITMQ9H3K2 345 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 PLSCR5A0PG75 271 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 TMEM200CA6NKL6 621 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 CTDSPLO15194 276 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 MED6O75586 246 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 ADAP1O75689 374 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 TSPAN15O95858 294 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 IFNA2P01563 188 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 IL5P05113 134 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 PSMB6P28072 239 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 ROM1Q03395 351 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 EDDM3AQ14507 147 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 ZNF766Q5HY98 468 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 DCAF10Q5QP82 559 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 DYRK2Q92630 601 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 KIF26AQ9ULI4 1882 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-216ENST00000486741 COL6A6A6NMZ7 2263 aa11.65□□□□□ -0.54
HMGN1-216ENST00000486741 LYZL6O75951 148 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 NOVA1P51513 510 aaKnown RBP11.65□□□□□ -0.55
HMGN1-216ENST00000486741 IFITM2Q01629 132 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 TSPO2Q5TGU0 170 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 FNDC7Q5VTL7 733 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF626Q68DY1 528 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 LYPD8Q6UX82 237 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 GLYATL2Q8WU03 294 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 HGDQ93099 445 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 CLDN16Q9Y5I7 305 aa11.65□□□□□ -0.55
HMGN1-216ENST00000486741 LNP1A1A4G5 178 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 J3QRE1 110 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 XRCC2O43543 280 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 HPP00738 406 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 RFPL3SP0C7P2 107 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 CNR1P21554 472 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 ZP4Q12836 540 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 Q5BKY6 102 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM255AQ5JRV8 349 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 ATPAF1Q5TC12 328 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-216ENST00000486741 AADACL3Q5VUY0 350 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 ARL11Q969Q4 196 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 PFDN5Q99471 154 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 SLC17A5Q9NRA2 495 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 FLVCR1Q9Y5Y0 555 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF816-ZNF321PA0A0X1KG74 233 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 RAC2P15153 192 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 RAB6AP20340 208 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 PIGPP57054 158 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 RPS27AP62979 156 aaKnown RBP11.64□□□□□ -0.55
HMGN1-216ENST00000486741 UBA52P62987 128 aaKnown RBP11.64□□□□□ -0.55
HMGN1-216ENST00000486741 TBC1D28Q2M2D7 210 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 NFAM1Q8NET5 270 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-216ENST00000486741 RBPMSQ93062 196 aaKnown RBP11.64□□□□□ -0.55
HMGN1-216ENST00000486741 OCSTAMPQ9BR26 566 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 HDHD3Q9BSH5 251 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-216ENST00000486741 FZR1Q9UM11 496 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 WASF3Q9UPY6 502 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 SMCO3A2RU48 225 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 DEGS1O15121 323 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 CDH26Q8IXH8 852 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
HMGN1-216ENST00000486741 KCNAB3O43448 404 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 SULT1A3P0DMM9 295 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 SULT1A4P0DMN0 295 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 VSIG10L2P0DP72 767 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 RAG2P55895 527 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 ALKBH6Q3KRA9 238 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 LGALSLQ3ZCW2 172 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-216ENST00000486741 CDCP2Q5VXM1 449 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 C17orf82Q86X59 251 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-216ENST00000486741 C9orf62Q8N4C0 152 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 ARHGEF39Q8N4T4 335 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
HMGN1-216ENST00000486741 PLPPR2Q96GM1 343 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms