RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 OR51I2Q9H344 312 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 MSL2Q9HCI7 577 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 TMEM100Q9NV29 134 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 COMMD3Q9UBI1 195 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 DUSP13Q9UII6 198 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 SLC7A11Q9UPY5 501 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 MRPS28Q9Y2Q9 187 aaKnown RBP7.01□□□□□ -1.29
USP4-210ENST00000483212 ETV7Q9Y603 341 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 V9GYH0 126 aa7.01□□□□□ -1.29
USP4-210ENST00000483212 HRNRQ86YZ3 2850 aaPredicted RBP7.01□□□□□ -1.29
USP4-210ENST00000483212 FAM221AA4D161 298 aa7□□□□□ -1.29
USP4-210ENST00000483212 CLDN1O95832 211 aa7□□□□□ -1.29
USP4-210ENST00000483212 BPNT1O95861 308 aa7□□□□□ -1.29
USP4-210ENST00000483212 ADH4P08319 380 aa7□□□□□ -1.29
USP4-210ENST00000483212 ELK1P19419 428 aa7□□□□□ -1.29
USP4-210ENST00000483212 TNFSF8P32971 234 aa7□□□□□ -1.29
USP4-210ENST00000483212 CD200P41217 278 aa7□□□□□ -1.29
USP4-210ENST00000483212 GPM6AP51674 278 aa7□□□□□ -1.29
USP4-210ENST00000483212 EFNB2P52799 333 aa7□□□□□ -1.29
USP4-210ENST00000483212 ATP1B3P54709 279 aa7□□□□□ -1.29
USP4-210ENST00000483212 GNG3P63215 75 aa7□□□□□ -1.29
USP4-210ENST00000483212 ZNF154Q13106 437 aa7□□□□□ -1.29
USP4-210ENST00000483212 PDZK1IP1Q13113 114 aa7□□□□□ -1.29
USP4-210ENST00000483212 OR8G1Q15617 311 aa7□□□□□ -1.29
USP4-210ENST00000483212 MOGQ16653 247 aa7□□□□□ -1.29
USP4-210ENST00000483212 SWI5Q1ZZU3 235 aa7□□□□□ -1.29
USP4-210ENST00000483212 SPRNQ5BIV9 151 aa7□□□□□ -1.29
USP4-210ENST00000483212 OR10K2Q6IF99 312 aa7□□□□□ -1.29
USP4-210ENST00000483212 MZT2AQ6P582 158 aa7□□□□□ -1.29
USP4-210ENST00000483212 GLIPR1L1Q6UWM5 242 aa7□□□□□ -1.29
USP4-210ENST00000483212 MEX3BQ6ZN04 569 aaKnown RBP7□□□□□ -1.29
USP4-210ENST00000483212 C11orf53Q8IXP5 236 aa7□□□□□ -1.29
USP4-210ENST00000483212 SAMD12Q8N8I0 201 aa7□□□□□ -1.29
USP4-210ENST00000483212 ZSCAN4Q8NAM6 433 aaPredicted RBP7□□□□□ -1.29
USP4-210ENST00000483212 TMEM104Q8NE00 496 aa7□□□□□ -1.29
USP4-210ENST00000483212 Q8NFD4 153 aa7□□□□□ -1.29
USP4-210ENST00000483212 PXT1Q8NFP0 134 aa7□□□□□ -1.29
USP4-210ENST00000483212 OR10AD1Q8NGE0 317 aa7□□□□□ -1.29
USP4-210ENST00000483212 OR13G1Q8NGZ3 307 aa7□□□□□ -1.29
USP4-210ENST00000483212 ZNF671Q8TAW3 534 aa7□□□□□ -1.29
USP4-210ENST00000483212 TNFAIP8L1Q8WVP5 186 aa7□□□□□ -1.29
USP4-210ENST00000483212 PTX4Q96A99 478 aa7□□□□□ -1.29
USP4-210ENST00000483212 TSC22D3Q99576 134 aa7□□□□□ -1.29
USP4-210ENST00000483212 DHRS9Q9BPW9 319 aa7□□□□□ -1.29
USP4-210ENST00000483212 MICU1Q9BPX6 476 aa7□□□□□ -1.29
USP4-210ENST00000483212 SPOCK3Q9BQ16 436 aa7□□□□□ -1.29
USP4-210ENST00000483212 RTL8AQ9BWD3 113 aa7□□□□□ -1.29
USP4-210ENST00000483212 KRTAP4-8Q9BYQ9 185 aa7□□□□□ -1.29
USP4-210ENST00000483212 ABCG5Q9H222 651 aa7□□□□□ -1.29
USP4-210ENST00000483212 PLK3Q9H4B4 646 aa7□□□□□ -1.29
USP4-210ENST00000483212 NEK6Q9HC98 313 aa7□□□□□ -1.29
USP4-210ENST00000483212 CYSLTR2Q9NS75 346 aa7□□□□□ -1.29
USP4-210ENST00000483212 IL36GQ9NZH8 169 aa7□□□□□ -1.29
USP4-210ENST00000483212 TAAR3PQ9P1P4 343 aa7□□□□□ -1.29
USP4-210ENST00000483212 GHRLQ9UBU3 117 aa7□□□□□ -1.29
USP4-210ENST00000483212 POU2F3Q9UKI9 436 aa7□□□□□ -1.29
USP4-210ENST00000483212 NOP16Q9Y3C1 178 aaKnown RBP7□□□□□ -1.29
USP4-210ENST00000483212 COL12A1Q99715 3063 aa7□□□□□ -1.29
USP4-210ENST00000483212 SPTBN1Q01082 2364 aaKnown RBP7□□□□□ -1.29
USP4-210ENST00000483212 TENM4Q6N022 2769 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 PLCE1Q9P212 2302 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 A0A1W2PP11 408 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 LRP5LA4QPB2 252 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 TMEM210A6NLX4 147 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 A6NNC1 897 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 FOXI3A8MTJ6 420 aaPredicted RBP6.99□□□□□ -1.29
USP4-210ENST00000483212 PRSS44E7EML9 344 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 F5H5P2 479 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 J3QKU1 62 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 J3QT63 122 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 SPRY1O43609 319 aaPredicted RBP6.99□□□□□ -1.29
USP4-210ENST00000483212 SYNGR1O43759 233 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 ANGPTL7O43827 346 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 KDM4BO94953 1096 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 GOSR1O95249 250 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 IGHV1-46P01743 117 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 APOA1P02647 267 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 CD55P08174 381 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 OCMP0CE72 109 aaPredicted RBP6.99□□□□□ -1.29
USP4-210ENST00000483212 UBBP0CG47 229 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 ARSBP15848 533 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 RAB6AP20340 208 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 APOBEC3AP31941 199 aaPredicted RBP6.99□□□□□ -1.29
USP4-210ENST00000483212 SERPINF1P36955 418 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 HAAOP46952 286 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 ZNF81P51508 661 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 CAPZA1P52907 286 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 IL24Q13007 206 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 UBE2NLQ5JXB2 153 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 AWAT2Q6E213 333 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 C11orf71Q6IPW1 123 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 SLC25A26Q70HW3 274 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 OR2W3Q7Z3T1 314 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 TMEM200AQ86VY9 491 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 LRRC28Q86X40 367 aaPredicted RBP6.99□□□□□ -1.29
USP4-210ENST00000483212 SAXO1Q8IYX7 474 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 CMTM4Q8IZR5 234 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 ZNF611Q8N823 705 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 PNLDC1Q8NA58 520 aaKnown RBP6.99□□□□□ -1.29
USP4-210ENST00000483212 SPERTQ8NA61 448 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms