RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 IFITM5A6NNB3 132 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 AIPO00170 330 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 ABCD4O14678 606 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 CLPXO76031 633 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 CST4P01036 141 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 RNF224P0DH78 156 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 CD37P11049 281 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 PRF1P14222 555 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 IGFBP2P18065 325 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 ATF1P18846 271 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 RAB3AP20336 220 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 BDKRB2P30411 391 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 SOX6P35712 828 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 MPV17P39210 176 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 RAD52P43351 418 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 RPS23P62266 143 aaKnown RBP5.68□□□□□ -1.5
USP48-208ENST00000479177 IL13RA1P78552 427 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 BSPH1Q075Z2 132 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 KRTAP1-1Q07627 177 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 SNTB1Q13884 538 aaKnown RBP5.68□□□□□ -1.5
USP48-208ENST00000479177 ZNF404Q494X3 552 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 CLVS2Q5SYC1 327 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 NCMAPQ5T1S8 102 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 DDI2Q5TDH0 399 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 MBNL2Q5VZF2 373 aaKnown RBP5.68□□□□□ -1.5
USP48-208ENST00000479177 OR2T2Q6IF00 324 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 UNQ6126/PRO20091Q6UXV3 157 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 LYPD6Q86Y78 171 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 CROCCP3Q8IVE0 287 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 C1orf174Q8IYL3 243 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 DNAAF1Q8NEP3 725 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 CSNK2A3Q8NEV1 391 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 NUP37Q8NFH4 326 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 OR52N4Q8NGI2 321 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 OR5D14Q8NGL3 314 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 MCFD2Q8NI22 146 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 LINC01560Q8TB33 94 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 KLF14Q8TD94 323 aaPredicted RBP5.68□□□□□ -1.5
USP48-208ENST00000479177 SSC4DQ8WTU2 575 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 TMEM171Q8WVE6 324 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 CMBLQ96DG6 245 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 FGF23Q9GZV9 251 aaPredicted RBP5.68□□□□□ -1.5
USP48-208ENST00000479177 NGBQ9NPG2 151 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 TMEM138Q9NPI0 162 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 GPR173Q9NS66 373 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 KCNN3Q9UGI6 736 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 NDRG3Q9UGV2 375 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 RALYQ9UKM9 306 aaKnown RBP5.68□□□□□ -1.5
USP48-208ENST00000479177 RHBDD3Q9Y3P4 386 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 SPEF1Q9Y4P9 236 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 V9GY05 133 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 ABCA12Q86UK0 2595 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 SPG11Q96JI7 2443 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 DCHS2Q6V1P9 2916 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 A0A0B4J203 849 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 TUBAL3A6NHL2 446 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 DEFB108AA8MXU0 73 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 IQCF6A8MYZ5 107 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 PYCARD-AS1I3L0S3 204 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 SLC17A2O00624 439 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 GMDSO60547 372 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 NRASP01111 189 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 ALDOBP05062 364 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 ERCC1P07992 297 aaPredicted RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 SLC2A2P11168 524 aaPredicted RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 ZNF250P15622 560 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 SELEP16581 610 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 KITLGP21583 273 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 PRKACBP22694 351 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 AZGP1P25311 298 aaKnown RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 LOXP28300 417 aaPredicted RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 GLRXP35754 106 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 PSMD7P51665 324 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 PSG7Q13046 419 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 DYNC1I2Q13409 638 aaKnown RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 CNN3Q15417 329 aaKnown RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 UBE2V2Q15819 145 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 RAB11BQ15907 218 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 ALKBH6Q3KRA9 238 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 ZNF718Q3SXZ3 478 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 BEX5Q5H9J7 111 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 C1orf100Q5SVJ3 147 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 IDNKQ5T6J7 187 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 PLCXD3Q63HM9 321 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 GLT8D1Q68CQ7 371 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 FAM166AQ6J272 317 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 RGS7BPQ6MZT1 257 aaPredicted RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 ADAM5Q6NVV9 412 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 CRIP3Q6Q6R5 217 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 RNF144BQ7Z419 303 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 ZDHHC23Q8IYP9 409 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 BHLHE23Q8NDY6 225 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 TBC1D15Q8TC07 691 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 NPRL2Q8WTW4 380 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 HPSE2Q8WWQ2 592 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 AP3S1Q92572 193 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 SPSB1Q96BD6 273 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 HAVCR1Q96D42 359 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 TECTBQ96PL2 329 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms