RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 C8orf46Q8TAG6 207 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 ST8SIA4Q92187 359 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 RORBQ92753 470 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 NLKQ9UBE8 527 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 DNAJB11Q9UBS4 358 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 SLC22A13Q9Y226 551 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 CENPVL3A0A0U1RRI6 287 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 DNAJC9-AS1A6NH13 148 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 J3QRE1 110 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 NDUFB3O43676 98 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 SFTPBP07988 381 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 ZNF85Q03923 595 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 BAMBIQ13145 260 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 PDCD1Q15116 288 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 METTL11BQ5VVY1 283 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 MEDAGQ5VYS4 303 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 PLCXD3Q63HM9 321 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 FGFRL1Q8N441 504 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 FAM216BQ8N7L0 139 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 CCDC54Q8NEL0 328 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 OR10H4Q8NGA5 316 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 GCDHQ92947 438 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-211ENST00000477612 MED30Q96HR3 178 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 GAFA1Q96PS6 74 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 PCGF1Q9BSM1 259 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 S100A14Q9HCY8 104 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 SNTG1Q9NSN8 517 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 IMPAD1Q9NX62 359 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 RASL12Q9NYN1 266 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 GTF2A1LQ9UNN4 478 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 SOX21Q9Y651 276 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-211ENST00000477612 KPTNQ9Y664 436 aa17.96■□□□□ 0.47
COL9A3-211ENST00000477612 OR2AT4A6NND4 320 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 SIGLEC5O15389 551 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 NOS1APO75052 506 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-211ENST00000477612 RPP14O95059 124 aaKnown RBP17.95■□□□□ 0.46
COL9A3-211ENST00000477612 APOL3O95236 402 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 RNASE1P07998 156 aaKnown RBP17.95■□□□□ 0.46
COL9A3-211ENST00000477612 ACAA1P09110 424 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-211ENST00000477612 ATP6V1E1P36543 226 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 CDONQ4KMG0 1287 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 LRRC10Q5BKY1 277 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 DMRTC1Q5HYR2 192 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 CBR4Q8N4T8 237 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 RNF166Q96A37 237 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-211ENST00000477612 DCTN5Q9BTE1 182 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 C9orf16Q9BUW7 83 aa17.95■□□□□ 0.46
COL9A3-211ENST00000477612 ENTPD6O75354 484 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 HKR1P10072 659 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 CAV3P56539 151 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 ARF6P62330 175 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 IL13RA1P78552 427 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 ZIK1Q3SY52 487 aaPredicted RBP17.94■□□□□ 0.46
COL9A3-211ENST00000477612 HAGHLQ6PII5 290 aaPredicted RBP17.94■□□□□ 0.46
COL9A3-211ENST00000477612 BRD3OSQ6XYD6 125 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 ZNF573Q86YE8 665 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 POC1AQ8NBT0 407 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 TMIGD2Q96BF3 282 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 ZNF222Q9UK12 451 aa17.94■□□□□ 0.46
COL9A3-211ENST00000477612 IGKV1D-17A0A075B6S4 117 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 PQLC2LA1A4F0 135 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 NKX6-3A6NJ46 265 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 PSG2P11465 335 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 GABRB1P18505 474 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 MPZP25189 248 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 CFPP27918 469 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 GMFBP60983 142 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 SLC9A3R2Q15599 337 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 DGUOKQ16854 277 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 METAP1DQ6UB28 335 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-211ENST00000477612 KCTD20Q7Z5Y7 419 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 PRSS35Q8N3Z0 413 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 KIR3DL3Q8N743 410 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 MBOAT4Q96T53 435 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 GPR173Q9NS66 373 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 MAB21L2Q9Y586 359 aa17.93■□□□□ 0.46
COL9A3-211ENST00000477612 A0A1B0GVI7 797 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 J3QT63 122 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 PGA5P0DJD9 388 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 SELLP14151 372 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 HAAOP46952 286 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 ACTC1P68032 377 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 ACTA1P68133 377 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 IKZF1Q13422 519 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 DEFB112Q30KQ8 113 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 ACP7Q6ZNF0 438 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 PQLC1Q8N2U9 271 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 GATAD2BQ8WXI9 593 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 C10orf35Q96D05 121 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 RNFT2Q96EX2 444 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 SDSLQ96GA7 329 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 SLC29A1Q99808 456 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 NOX4Q9NPH5 578 aa17.92■□□□□ 0.46
COL9A3-211ENST00000477612 SLC25A10Q9UBX3 287 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-211ENST00000477612 EXOGQ9Y2C4 368 aaKnown RBP17.92■□□□□ 0.46
COL9A3-211ENST00000477612 SNTNA6NMZ2 147 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 SYT7O43581 403 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 SYNGR1O43759 233 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 FOXL1Q12952 345 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 FDX2Q6P4F2 183 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms