RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 NELFEP18615 380 aaKnown RBP3.3□□□□□ -1.88
VPS50-212ENST00000476413 BGNP21810 368 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 CD9P21926 228 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 KRTAP13-2Q52LG2 175 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 NEGR1Q7Z3B1 354 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 ST20-AS1Q8NBB2 130 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 OR2M7Q8NG81 312 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 OR4M2Q8NGB6 313 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 SFXN5Q8TD22 340 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 ING5Q8WYH8 240 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 SNF8Q96H20 258 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 ZFP3Q96NJ6 502 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 ZNF649Q9BS31 505 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 HINT2Q9BX68 163 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 ZNF717Q9BY31 904 aaPredicted RBP3.3□□□□□ -1.88
VPS50-212ENST00000476413 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 SYT4Q9H2B2 425 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 HAUS4Q9H6D7 363 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 CFL2Q9Y281 166 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 KIAA1671Q9BY89 1806 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 COL4A4P53420 1690 aaPredicted RBP3.3□□□□□ -1.88
VPS50-212ENST00000476413 SCN4AP35499 1836 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 IGKV1-6A0A0C4DH72 117 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 FAM240AA0A1B0GVK7 77 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 LGALS9O00182 355 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 POLR1CO15160 346 aaPredicted RBP3.29□□□□□ -1.88
VPS50-212ENST00000476413 RPN2P04844 631 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 NTF3P20783 257 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 PRSS3P35030 304 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 TAS2R43P59537 309 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 CA13Q8N1Q1 262 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 IP6K3Q96PC2 410 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 ZNF2Q9BSG1 426 aaPredicted RBP3.29□□□□□ -1.88
VPS50-212ENST00000476413 TAS2R5Q9NYW4 299 aa3.29□□□□□ -1.88
VPS50-212ENST00000476413 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 ADAMTSL3P82987 1691 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 PSMD11O00231 422 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 NDUFS5O43920 106 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 RBBP9O75884 186 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 LHBP01229 141 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 IGKV1-39P01597 117 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 IGKV1D-39P04432 117 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 CCDC172P0C7W6 258 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 CD28P10747 220 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 CELP19835 753 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 PSMB5P28074 263 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 ERFP50548 548 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 PPP1CAP62136 330 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 VAMP3Q15836 100 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 SP6Q3SY56 376 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 HHATQ5VTY9 493 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 DEGS2Q6QHC5 323 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 FAM19A1Q7Z5A9 133 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 STK40Q8N2I9 435 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 LINC00337Q8N6G1 96 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 OR2Z1Q8NG97 314 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 OR6N2Q8NGY6 317 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 MARVELD1Q9BSK0 173 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 PRRG3Q9BZD7 231 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 RAB1BQ9H0U4 201 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 LINC00574Q9H8X3 128 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 C6orf50Q9HD87 102 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 ZNF229Q9UJW7 825 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 ACOT9Q9Y305 439 aa3.28□□□□□ -1.88
VPS50-212ENST00000476413 BAZ2AQ9UIF9 1905 aaKnown RBP3.28□□□□□ -1.88
VPS50-212ENST00000476413 TICRRQ7Z2Z1 1910 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 IGLV2-18A0A075B6J9 118 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 LOC102724200A0A096LPH7 203 aaPredicted RBP3.27□□□□□ -1.89
VPS50-212ENST00000476413 FAM25EA8MYX2 175 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 CENPBD1B2RD01 187 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 CDRT1O95170 752 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 GRB2P62993 217 aaKnown RBP3.27□□□□□ -1.89
VPS50-212ENST00000476413 TNXAQ16473 311 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 C18orf21Q32NC0 220 aaPredicted RBP3.27□□□□□ -1.89
VPS50-212ENST00000476413 FBXL19-AS1Q494R0 122 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 CDNFQ49AH0 187 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 KLHL12Q53G59 568 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 TTC32Q5I0X7 151 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 LIN9Q5TKA1 542 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 ZNF561Q8N587 486 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 OR5M1Q8NGP8 315 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 LGALS14Q8TCE9 139 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 TMIGD2Q96BF3 282 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 C19orf60Q96EN9 201 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 WDR34Q96EX3 536 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 MSANTD3Q96H12 275 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 CPB2Q96IY4 423 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 COA1Q9GZY4 146 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 SND1-IT1Q9HBX3 110 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 AGPAT3Q9NRZ7 376 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 RMND1Q9NWS8 449 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 MARCOQ9UEW3 520 aaPredicted RBP3.27□□□□□ -1.89
VPS50-212ENST00000476413 SLC7A11Q9UPY5 501 aa3.27□□□□□ -1.89
VPS50-212ENST00000476413 TMEM72A0PK05 275 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 TPM1P09493 284 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 CCL2P13500 99 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 CCNOP22674 350 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 TGFBR1P36897 503 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 GPR4P46093 362 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms