RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CLEC5AQ9NY25 188 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 CDC40O60508 579 aaKnown RBP eCLIP7.4□□□□□ -1.22
VAPB-205ENST00000476395 TACSTD2P09758 323 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 PNMTP11086 282 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 FSTP19883 344 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 ASCL1P50553 236 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 NUTF2P61970 127 aaKnown RBP7.4□□□□□ -1.22
VAPB-205ENST00000476395 RASGEF1BQ0VAM2 473 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 HYAL1Q12794 435 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 C1orf61Q13536 156 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 ANKRD55Q3KP44 614 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 C14orf28Q4W4Y0 310 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 RNASE10Q5GAN6 216 aaKnown RBP7.4□□□□□ -1.22
VAPB-205ENST00000476395 PTCRAQ6ISU1 281 aaPredicted RBP7.4□□□□□ -1.22
VAPB-205ENST00000476395 KLHL24Q6TFL4 600 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 SMIM15Q7Z3B0 74 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 AQP3Q92482 292 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 C2orf88Q9BSF0 95 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 SH3BGRL3Q9H299 93 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 SLC17A5Q9NRA2 495 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 PRTFDC1Q9NRG1 225 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 MMACHCQ9Y4U1 282 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 LRP12Q9Y561 859 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 WIF1Q9Y5W5 379 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 KPTNQ9Y664 436 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 A0A0U1RQV5 110 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 SPTY2D1-AS1A0A0U1RR47 76 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 C22orf46C9J442 243 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 BCAT2O15382 392 aaPredicted RBP7.4□□□□□ -1.23
VAPB-205ENST00000476395 ZNF264O43296 627 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 ZNF217O75362 1048 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 DXOO77932 396 aaKnown RBP7.4□□□□□ -1.23
VAPB-205ENST00000476395 IL18BPO95998 194 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 IFNA17P01571 189 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 IL2RAP01589 272 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 RNH1P13489 461 aaKnown RBP7.4□□□□□ -1.23
VAPB-205ENST00000476395 GNB3P16520 340 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 TUBG1P23258 451 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 IL2RGP31785 369 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 PPP1CCP36873 323 aaKnown RBP7.4□□□□□ -1.23
VAPB-205ENST00000476395 YPEL5P62699 121 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 RAP1AP62834 184 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 NAAAQ02083 359 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 HAGHQ16775 308 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 PCK2Q16822 640 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 LCN10Q6JVE6 187 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 TRAPPC6BQ86SZ2 158 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 ZNF584Q8IVC4 421 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 TDHQ8IZJ6 230 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 ZNF664Q8N3J9 261 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 CHST4Q8NCG5 386 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 TSLPQ969D9 159 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 ERGIC1Q969X5 290 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 TUBG2Q9NRH3 451 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 UBQLN4Q9NRR5 601 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 SPACA6W5XKT8 324 aa7.4□□□□□ -1.23
VAPB-205ENST00000476395 IGHV5-51A0A0C4DH38 117 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 A0A1W2PN81 502 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 PRSS37A4D1T9 235 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 FTCDNL1E5RQL4 147 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 TSPAN2O60636 221 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 TSPAN15O95858 294 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 IGHMP01871 453 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 NPSP0C0P6 89 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 CHRNA7P36544 502 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 FOXL2P58012 376 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 PKIAP61925 76 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 HHEXQ03014 270 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 ACKR1Q16570 336 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 DTX1Q86Y01 620 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 YAF2Q8IY57 180 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 ZNF679Q8IYX0 411 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 JAGN1Q8N5M9 183 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 THAP3Q8WTV1 239 aaPredicted RBP7.39□□□□□ -1.23
VAPB-205ENST00000476395 TMEM230Q96A57 120 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 DGAT2Q96PD7 388 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 LRRC61Q9BV99 259 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 SOHLH2Q9NX45 425 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 CDC14CA4D256 554 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 H0YL77 283 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 RAB27BO00194 218 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 TOX3O15405 576 aaPredicted RBP7.39□□□□□ -1.23
VAPB-205ENST00000476395 SNCAP37840 140 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 PMELP40967 661 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 GRK6P43250 576 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 GFERP55789 205 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 ZNF260Q3ZCT1 412 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 MARCH3Q86UD3 253 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 ZNF441Q8N8Z8 693 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 OR14K1Q8NGZ2 314 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 GAL3ST4Q96RP7 486 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 ABHD6Q9BV23 337 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 FBXL17Q9UF56 701 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 SDK1Q7Z5N4 2213 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 RP1P56715 2156 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 TRBV6-7A0A0A0MS04 114 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 A0A0A6YYD4 124 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 PGPEP1LA6NFU8 196 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 C17orf105B2RV13 164 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 TSTD3H0UI37 97 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms