RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 LRRC10Q5BKY1 277 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 LCN1P1Q5VSP4 162 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 KDM4DQ6B0I6 523 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 DEGS2Q6QHC5 323 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 ZNF322Q6U7Q0 402 aaPredicted RBP13.67□□□□□ -0.22
USP40-212ENST00000473191 SLC35F2Q8IXU6 374 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 C8orf46Q8TAG6 207 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 C17orf50Q8WW18 174 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 WFDC12Q8WWY7 111 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 AQP3Q92482 292 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 TBX5Q99593 518 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 GPR173Q9NS66 373 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 NUFIP1Q9UHK0 495 aaKnown RBP13.67□□□□□ -0.22
USP40-212ENST00000473191 MRM2Q9UI43 246 aaKnown RBP13.67□□□□□ -0.22
USP40-212ENST00000473191 GTF2A1LQ9UNN4 478 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 SLC22A13Q9Y226 551 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 A0A1B0GTI1 187 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 POM121CA8CG34 1229 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 GPR137BO60478 399 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 NDUFB7P17568 137 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 PAX6P26367 422 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 ERVFRD-1P60508 538 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 SNCBQ16143 134 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 C11orf91Q3C1V1 193 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 PLCXD3Q63HM9 321 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 HCP5Q6MZN7 132 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 LDLRAD3Q86YD5 345 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 CD177Q8N6Q3 437 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 TMEM163Q8TC26 289 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 SSMEM1Q8WWF3 244 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 DNAJC9Q8WXX5 260 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 HIST1H2AAQ96QV6 131 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 CIB1Q99828 191 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 TEX12Q9BXU0 123 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 ABCB9Q9NP78 766 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 MMP24Q9Y5R2 645 aa13.66□□□□□ -0.22
USP40-212ENST00000473191 NKX6-3A6NJ46 265 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 ACOD1A6NK06 481 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 LOC110117498-PIK3R3F6TDL0 507 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 ZNF254O75437 659 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 DHRS3O75911 302 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 RIPPLY1Q0D2K3 151 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 ODF4Q2M2E3 257 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 NXNL2Q5VZ03 156 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 THAP5Q7Z6K1 395 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 TMEM86BQ8N661 226 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 OR5A2Q8NGI9 324 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 OR51G2Q8NGK0 314 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 OR14K1Q8NGZ2 314 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 ASB17Q8WXJ9 295 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 DUS3LQ96G46 650 aaKnown RBP13.65□□□□□ -0.22
USP40-212ENST00000473191 GABARAPL1Q9H0R8 117 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 DNTTIP1Q9H147 329 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 SLITRK2Q9H156 845 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 OR52A1Q9UKL2 312 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 POMT1Q9Y6A1 747 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 R4GMQ9 66 aa13.65□□□□□ -0.22
USP40-212ENST00000473191 RFPL4AA6NLU0 287 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 RFPL4AL1F8VTS6 287 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 NPFFO15130 113 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 RPP14O95059 124 aaKnown RBP13.64□□□□□ -0.23
USP40-212ENST00000473191 KNG1P01042 644 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 NRASP01111 189 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 CRYBA1P05813 215 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 ZNF829Q3KNS6 432 aaPredicted RBP13.64□□□□□ -0.23
USP40-212ENST00000473191 OLFML2AQ68BL7 652 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 TMEM42Q69YG0 159 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 METAP1DQ6UB28 335 aaPredicted RBP13.64□□□□□ -0.23
USP40-212ENST00000473191 ACP7Q6ZNF0 438 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 ELMOD2Q8IZ81 293 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 TMEM185AQ8NFB2 350 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 TBC1D15Q8TC07 691 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 C19orf12Q9NSK7 152 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 ZNRD1Q9P1U0 126 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 ENPP5Q9UJA9 477 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 AP4S1Q9Y587 144 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 TMEM14AQ9Y6G1 99 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 V9GYS6 101 aa13.64□□□□□ -0.23
USP40-212ENST00000473191 PKD1L1Q8TDX9 2849 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 A0A1W2PQ09 198 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 SLC22A31A6NKX4 558 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 OR5B21A6NL26 309 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 GPR37O15354 613 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 NDUFA7O95182 113 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 FASP25445 335 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 SAA4P35542 130 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 HAAOP46952 286 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 CAV3P56539 151 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 BCL2L15Q5TBC7 163 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 C1orf146Q5VVC0 180 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 TREML4Q6UXN2 200 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 ANGPTL5Q86XS5 388 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 CALHM1Q8IU99 346 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 OR4F5Q8NH21 305 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 LINC01006Q8NI28 216 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 DYRK2Q92630 601 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 UBE2FQ969M7 185 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 MED30Q96HR3 178 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 AJUBAQ96IF1 538 aa13.63□□□□□ -0.23
USP40-212ENST00000473191 BEX1Q9HBH7 125 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms