RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ZNF671Q8TAW3 534 aa17.44■□□□□ 0.38
TOP3A-204ENST00000472959 LRRC29Q8WV35 223 aa17.44■□□□□ 0.38
TOP3A-204ENST00000472959 RGP1Q92546 391 aaPredicted RBP17.44■□□□□ 0.38
TOP3A-204ENST00000472959 ZNF665Q9H7R5 613 aa17.44■□□□□ 0.38
TOP3A-204ENST00000472959 PCDHB10Q9UN67 800 aa17.44■□□□□ 0.38
TOP3A-204ENST00000472959 LSM2Q9Y333 95 aaKnown RBP17.44■□□□□ 0.38
TOP3A-204ENST00000472959 CD5LO43866 347 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 ZNF205O95201 554 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 IGHV2-5P01817 119 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 CD2P06729 351 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 ATF1P18846 271 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 CELP19835 753 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 PRKACBP22694 351 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 KRTAP1-1Q07627 177 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 ZNF404Q494X3 552 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 FAM201AQ5SY85 155 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 HAGHLQ6PII5 290 aaPredicted RBP17.43■□□□□ 0.38
TOP3A-204ENST00000472959 ZFP41Q8N8Y5 198 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 BOLLQ8N9W6 283 aaKnown RBP17.43■□□□□ 0.38
TOP3A-204ENST00000472959 SPSB1Q96BD6 273 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 GSX1Q9H4S2 264 aaPredicted RBP17.43■□□□□ 0.38
TOP3A-204ENST00000472959 ZCCHC4Q9H5U6 513 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 NEK6Q9HC98 313 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 CSPG4Q6UVK1 2322 aa17.43■□□□□ 0.38
TOP3A-204ENST00000472959 TRAV38-1A0A0B4J264 116 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 FAM230AA0A1W2PPH8 454 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 OOEPA6NGQ2 149 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 ALX3O95076 343 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 OCM2P0CE71 109 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 HAAOP46952 286 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 MED22Q15528 200 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 LINC01356Q8N9X3 169 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 AQP3Q92482 292 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 BORCS8Q96FH0 119 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 PGLYRP3Q96LB9 341 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 OR5M11Q96RB7 305 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 METTL17Q9H7H0 456 aaPredicted RBP17.42■□□□□ 0.38
TOP3A-204ENST00000472959 PATZ1Q9HBE1 687 aaKnown RBP17.42■□□□□ 0.38
TOP3A-204ENST00000472959 POLDIP2Q9Y2S7 368 aa17.42■□□□□ 0.38
TOP3A-204ENST00000472959 IGKV1-9A0A0C4DH69 117 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 SRRM5B3KS81 715 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 B4DSR2 109 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 J3QT63 122 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 NDUFA2O43678 99 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 OCMP0CE72 109 aaPredicted RBP17.41■□□□□ 0.38
TOP3A-204ENST00000472959 MUC1P15941 1255 aaPredicted RBP17.41■□□□□ 0.38
TOP3A-204ENST00000472959 RBP2P50120 134 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 GPR50Q13585 617 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 TEX36Q5VZQ5 186 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 DCDC5Q6ZRR9 648 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 DEFB108BQ8NET1 73 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 TRMT10AQ8TBZ6 339 aaKnown RBP17.41■□□□□ 0.38
TOP3A-204ENST00000472959 NPRL2Q8WTW4 380 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 MSI2Q96DH6 328 aaKnown RBP17.41■□□□□ 0.38
TOP3A-204ENST00000472959 TMEM246Q9BRR3 403 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 PKIBQ9C010 78 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 MIOXQ9UGB7 285 aa17.41■□□□□ 0.38
TOP3A-204ENST00000472959 CR1P17927 2039 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 TRBV5-5A0A0J9YX44 114 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 CEACAM18A8MTB9 384 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 C3orf80F5H4A9 247 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 ACAA1P09110 424 aaPredicted RBP17.4■□□□□ 0.38
TOP3A-204ENST00000472959 EGR1P18146 543 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 MPZP25189 248 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 AZGP1P25311 298 aaKnown RBP17.4■□□□□ 0.38
TOP3A-204ENST00000472959 CD80P33681 288 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 SOX2P48431 317 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 ATP1B3P54709 279 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 DOC2BQ14184 412 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 TBCEQ15813 527 aaPredicted RBP17.4■□□□□ 0.38
TOP3A-204ENST00000472959 MICBQ29980 383 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 Q499Y3 187 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 SFRP4Q6FHJ7 346 aaPredicted RBP17.4■□□□□ 0.38
TOP3A-204ENST00000472959 LHFPL2Q6ZUX7 228 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 OR13C9Q8NGT0 318 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 TMEM106AQ96A25 262 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 C12orf43Q96C57 262 aaKnown RBP17.4■□□□□ 0.38
TOP3A-204ENST00000472959 ISYNA1Q9NPH2 558 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 LRRC42Q9Y546 428 aa17.4■□□□□ 0.38
TOP3A-204ENST00000472959 TEP1Q99973 2627 aaKnown RBP17.4■□□□□ 0.38
TOP3A-204ENST00000472959 PNMA8CA0A1B0GUJ8 204 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 F5H0A9 414 aaPredicted RBP17.39■□□□□ 0.37
TOP3A-204ENST00000472959 NOS1APO75052 506 aaPredicted RBP17.39■□□□□ 0.37
TOP3A-204ENST00000472959 RHBDL1O75783 438 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 MTCP1P56278 107 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 RPS11P62280 158 aaKnown RBP eCLIP17.39■□□□□ 0.37
TOP3A-204ENST00000472959 IL24Q13007 206 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 NLRC3Q7RTR2 1065 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 MS4A15Q8N5U1 240 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 C19orf18Q8NEA5 215 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 THRSPQ92748 146 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 OPALINQ96PE5 141 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 RASL12Q9NYN1 266 aa17.39■□□□□ 0.37
TOP3A-204ENST00000472959 ABCA1O95477 2261 aa17.38■□□□□ 0.37
TOP3A-204ENST00000472959 IGKV1-27A0A075B6S5 117 aa17.38■□□□□ 0.37
TOP3A-204ENST00000472959 FAM157AC9JC47 383 aa17.38■□□□□ 0.37
TOP3A-204ENST00000472959 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.38■□□□□ 0.37
TOP3A-204ENST00000472959 AKR7A2O43488 359 aa17.38■□□□□ 0.37
TOP3A-204ENST00000472959 SULT1B1O43704 296 aa17.38■□□□□ 0.37
TOP3A-204ENST00000472959 TGFAP01135 160 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms