RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 NEUROG1Q92886 237 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 SPTSSAQ969W0 71 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 PGAM5Q96HS1 289 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 DERL3Q96Q80 235 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 KCNS3Q9BQ31 491 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 AIFM2Q9BRQ8 373 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 PBOV1Q9GZY1 135 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 MS4A5Q9H3V2 200 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 ESRP2Q9H6T0 727 aaKnown RBP5.48□□□□□ -1.53
HDAC1-205ENST00000472928 ZMAT4Q9H898 229 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 NOX4Q9NPH5 578 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 AKIP1Q9NQ31 210 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 NPAP1Q9NZP6 1156 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 LPAR3Q9UBY5 353 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 ZMAT5Q9UDW3 170 aaKnown RBP5.48□□□□□ -1.53
HDAC1-205ENST00000472928 ATPIF1Q9UII2 106 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 RBMX2Q9Y388 322 aaKnown RBP5.48□□□□□ -1.53
HDAC1-205ENST00000472928 TIMM10BQ9Y5J6 103 aa5.48□□□□□ -1.53
HDAC1-205ENST00000472928 TRBV5-7A0A0A0MS05 114 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 A0A1W2PPK0 400 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 APOC1P02654 83 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 UCHL1P09936 223 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 PPP3CBP16298 524 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 ZNF20P17024 532 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 SRD5A1P18405 259 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 IL32P24001 234 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 APEX1P27695 318 aaKnown RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 CFPP27918 469 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 OTX1P32242 354 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 SOX6P35712 828 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 ARR3P36575 388 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 RPS19P39019 145 aaKnown RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 MAGEB1P43366 347 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 CAV3P56539 151 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 HGFACQ04756 655 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 LOXL1Q08397 574 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 TSC22D1Q15714 1073 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 GSG1Q2KHT4 349 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 KRTAP27-1Q3LI81 207 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 TMEM244Q5VVB8 128 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 DRAM2Q6UX65 266 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 STAC2Q6ZMT1 411 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 IDO2Q6ZQW0 420 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 IL17RELQ6ZVW7 336 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 RHOUQ7L0Q8 258 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 BHLHA15Q7RTS1 189 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 DPPA2Q7Z7J5 298 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 ELMOD2Q8IZ81 293 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 GABRG1Q8N1C3 465 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 C1orf162Q8NEQ5 155 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 MCFD2Q8NI22 146 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 OR51E1Q8TCB6 317 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 CAPSLQ8WWF8 208 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 TMEM106AQ96A25 262 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 SLC25A46Q96AG3 418 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 ORAI1Q96D31 301 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 WACQ9BTA9 647 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 BARHL1Q9BZE3 327 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 SLIRPQ9GZT3 109 aaKnown RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 C6orf62Q9GZU0 229 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 SHARPINQ9H0F6 387 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 PPIL3Q9H2H8 161 aaKnown RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 GPR84Q9NQS5 396 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 SLC17A5Q9NRA2 495 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 MBNL3Q9NUK0 354 aaKnown RBP5.47□□□□□ -1.53
HDAC1-205ENST00000472928 C14orf119Q9NWQ9 140 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 HHLA2Q9UM44 414 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 DHDHQ9UQ10 334 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 PMF1-BGLAPU3KQ54 211 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 VWFP04275 2813 aa5.47□□□□□ -1.53
HDAC1-205ENST00000472928 ARPC4-TTLL3A0A0A6YYG9 625 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 IQCMA0A1B0GVH7 501 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 A0A1W2PR80 420 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 C5orf49A4QMS7 147 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 C5orf63A6NC05 138 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 ANXA2P2A6NMY6 339 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 PIN1P1O15428 100 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 SYT7O43581 403 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 LMX1BO60663 402 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 CD8AP01732 235 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 LCATP04180 440 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 ISG15P05161 165 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 CD2P06729 351 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 IGHV4-31P0DP07 118 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 COX5BP10606 129 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 CTRB1P17538 263 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 EGR1P18146 543 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 RAB3BP20337 219 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 STOMP27105 288 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 APLNRP35414 380 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 GNALP38405 381 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 RORCP51449 518 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 IDH3GP51553 393 aaPredicted RBP5.46□□□□□ -1.54
HDAC1-205ENST00000472928 OR10A3P58181 314 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 RAB1AP62820 205 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 PLP2Q04941 152 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 GABRA6Q16445 453 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 SNAI3Q3KNW1 292 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 ZNF404Q494X3 552 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 CEP78Q5JTW2 689 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms