RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 RHBDD3Q9Y3P4 386 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 SHANK1Q9Y566 2161 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 LOC102724200A0A096LPH7 203 aaPredicted RBP2.03□□□□□ -2.08
LRCH3-211ENST00000466054 ARPC4-TTLL3A0A0A6YYG9 625 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 TRAV8-4A0A0B4J246 113 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 IGKV1-6A0A0C4DH72 117 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 A0A0G2JMP0 313 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 A0A0X1KG70 313 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 GOLGA6L7A0A1B0GV03 622 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 A0A1W2PRF3 423 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 A0A1W2PRM7 423 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 DFFAO00273 331 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 TRDMT1O14717 391 aaKnown RBP2.03□□□□□ -2.08
LRCH3-211ENST00000466054 SMC2O95347 1197 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 FSTL3O95633 263 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 GCGP01275 180 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 IGKV1-39P01597 117 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 P01737 135 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 IGKV1D-39P04432 117 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 P0C880 135 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 CCT6AP40227 531 aaKnown RBP2.03□□□□□ -2.08
LRCH3-211ENST00000466054 CSKP41240 450 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 PSMD4P55036 377 aaKnown RBP2.03□□□□□ -2.08
LRCH3-211ENST00000466054 ADIGQ0VDE8 80 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 BAMBIQ13145 260 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 ZNF678Q5SXM1 525 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 SLC35D2Q76EJ3 337 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 ZNF664Q8N3J9 261 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 OR2M7Q8NG81 312 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 YIPF5Q969M3 257 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 Q96MT0 163 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 KRTAP4-1Q9BYQ7 146 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 API5Q9BZZ5 524 aaKnown RBP2.03□□□□□ -2.08
LRCH3-211ENST00000466054 TAS2R1Q9NYW7 299 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 ZNF391Q9UJN7 358 aa2.03□□□□□ -2.08
LRCH3-211ENST00000466054 RPRD2Q5VT52 1461 aaKnown RBP2.02□□□□□ -2.09
LRCH3-211ENST00000466054 TRAV8-6A0A0B4J262 113 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 IGHV2OR16-5A0A0B4J2B6 119 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 CLDN34H7C241 214 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 CBR3O75828 277 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 INAFM2P0DMQ5 153 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 PEX19P40855 299 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 GRB2P62993 217 aaKnown RBP2.02□□□□□ -2.09
LRCH3-211ENST00000466054 PAFAH1B2P68402 229 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 MEF2BQ02080 365 aaPredicted RBP2.02□□□□□ -2.09
LRCH3-211ENST00000466054 PRKCDQ05655 676 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 ST3GAL4Q11206 333 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 FBXL19-AS1Q494R0 122 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 SPIN3Q5JUX0 258 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 MRPL2Q5T653 305 aaKnown RBP2.02□□□□□ -2.09
LRCH3-211ENST00000466054 THOC7Q6I9Y2 204 aaKnown RBP2.02□□□□□ -2.09
LRCH3-211ENST00000466054 OR5T3Q8NGG3 340 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 OR6K6Q8NGW6 343 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 ZFAND1Q8TCF1 268 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 OR8D1Q8WZ84 308 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 MS4A8Q9BY19 250 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 CA10Q9NS85 328 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 TMEM100Q9NV29 134 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 DDX18Q9NVP1 670 aaKnown RBP2.02□□□□□ -2.09
LRCH3-211ENST00000466054 STX18Q9P2W9 335 aaKnown RBP2.02□□□□□ -2.09
LRCH3-211ENST00000466054 ZNF229Q9UJW7 825 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 PPIL1Q9Y3C6 166 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 KLF12Q9Y4X4 402 aa2.02□□□□□ -2.09
LRCH3-211ENST00000466054 KIR2DS1A0A191URI9 304 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 IGLV6-57P01721 117 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 OR4Q2P0C623 313 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 CFHR2P36980 270 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 PSMB2P49721 201 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 ATP5G2Q06055 141 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 MEF2CQ06413 473 aaPredicted RBP2.01□□□□□ -2.09
LRCH3-211ENST00000466054 DOC2AQ14183 400 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 CPTPQ5TA50 214 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 USP50Q70EL3 339 aaPredicted RBP2.01□□□□□ -2.09
LRCH3-211ENST00000466054 PDPNQ86YL7 162 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 ZNF420Q8TAQ5 688 aaPredicted RBP2.01□□□□□ -2.09
LRCH3-211ENST00000466054 ORAOV1Q8WV07 137 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 HGDQ93099 445 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 ZNF649Q9BS31 505 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 INIPQ9NRY2 104 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 SLC22A7Q9Y694 548 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 ENPP4Q9Y6X5 453 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 NEURL4Q96JN8 1562 aa2.01□□□□□ -2.09
LRCH3-211ENST00000466054 LTBP4Q8N2S1 1624 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 IGKV1D-16P01601 117 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 PRKACAP17612 351 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 HLA-GP17693 338 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 TUBG1P23258 451 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 IVDP26440 423 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 RGS6P49758 472 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 HCCSP53701 268 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 OR12D2P58182 307 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 PSMC5P62195 406 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 FAM131AQ6UXB0 335 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 TRMT10CQ7L0Y3 403 aaKnown RBP2□□□□□ -2.09
LRCH3-211ENST00000466054 ADM2Q7Z4H4 148 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 VTCN1Q7Z7D3 282 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 LINC00523Q86TU6 105 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 LRP11Q86VZ4 500 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 LRRC8AQ8IWT6 810 aa2□□□□□ -2.09
LRCH3-211ENST00000466054 ZCCHC24Q8N2G6 241 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms