RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 KIR2DL5AQ8N109 375 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 OR5B3Q8NH48 314 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 KIR2DL5BQ8NHK3 375 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 DYRK2Q92630 601 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 CCDC32Q9BV29 185 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 ESRP2Q9H6T0 727 aaKnown RBP6.79□□□□□ -1.32
BRCC3-208ENST00000453705 NMNAT1Q9HAN9 279 aaPredicted RBP6.79□□□□□ -1.32
BRCC3-208ENST00000453705 GPR173Q9NS66 373 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 C14orf105Q9NVL8 296 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 IL36GQ9NZH8 169 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 TRAPPC4Q9Y296 219 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 UFC1Q9Y3C8 167 aa6.79□□□□□ -1.32
BRCC3-208ENST00000453705 CLDN24A6NM45 220 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 FGF16O43320 207 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 CYP7B1O75881 506 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 HPP00738 406 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 DBIP07108 87 aaKnown RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF806P0C7X5 589 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ACP2P11117 423 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF43P17038 809 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 FMO3P31513 532 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 IFNGR2P38484 337 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 PDLIM4P50479 330 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 OR10A3P58181 314 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 MELKQ14680 651 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 INPP5JQ15735 1006 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 PGGHGQ32M88 737 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 TYW3Q6IPR3 259 aaKnown RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ADAM5Q6NVV9 412 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 TNFAIP8L2Q6P589 184 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 C19orf48Q6RUI8 117 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF782Q6ZMW2 699 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 RAB43Q86YS6 212 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 RNF113BQ8IZP6 322 aaKnown RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 LINC01561Q8N1V8 128 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 OR4D11Q8NGI4 311 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 OR52H1Q8NGJ2 320 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 OR5L2Q8NGL0 311 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 UCN3Q969E3 161 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 NODALQ96S42 347 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF226Q9NYT6 803 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 IKZF2Q9UKS7 526 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 CHST2Q9Y4C5 530 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 CFAP54Q96N23 3096 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 IRGMA1A4Y4 181 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 LOC110117498-PIK3R3F6TDL0 507 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 NPIPB9F8W1W9 429 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 M0R036 132 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 LYPD3O95274 346 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 C1QBP02746 253 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 TYMSP04818 313 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 CELA2BP08218 269 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 AKR1C4P17516 323 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 PRKACGP22612 351 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 FUT6P51993 359 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF141Q15928 474 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF404Q494X3 552 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 GLYR1Q49A26 553 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 FBXW9Q5XUX1 488 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ANKRD34AQ69YU3 496 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 DNM1P34Q6PK57 102 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 WDR74Q6RFH5 385 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 RASSF6Q6ZTQ3 369 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 C8orf86Q6ZUL3 223 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 LFNGQ8NES3 379 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ATP6V1C2Q8NEY4 427 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 GJC3Q8NFK1 279 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 GNPDA2Q8TDQ7 276 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 NEDD4LQ96PU5 975 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 OR6C1Q96RD1 312 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ALOXE3Q9BYJ1 711 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 METTL17Q9H7H0 456 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-208ENST00000453705 ASB6Q9NWX5 421 aa6.78□□□□□ -1.32
BRCC3-208ENST00000453705 EFCAB9A8MZ26 197 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 FOXS1O43638 330 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 SLC22A5O76082 557 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 OXTP01178 125 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 PSMA1P25786 263 aaKnown RBP6.77□□□□□ -1.33
BRCC3-208ENST00000453705 YAP1P46937 504 aaKnown RBP6.77□□□□□ -1.33
BRCC3-208ENST00000453705 SOX2P48431 317 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 CAV2P51636 162 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 RAB8AP61006 207 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 CDK5Q00535 292 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 PHLDA2Q53GA4 152 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 ACTL10Q5JWF8 245 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 NXNL2Q5VZ03 156 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 OR8G2PQ6IF36 304 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 ATRAIDQ6UW56 229 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 TFAP2EQ6VUC0 442 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 TMED4Q7Z7H5 227 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 GALNT10Q86SR1 603 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 D2HGDHQ8N465 521 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 MCFD2Q8NI22 146 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 C8orf44Q96CB5 159 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 COL21A1Q96P44 957 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 GFI1Q99684 422 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 TMEM208Q9BTX3 173 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 NANSQ9NR45 359 aa6.77□□□□□ -1.33
BRCC3-208ENST00000453705 TESQ9UGI8 421 aaKnown RBP6.77□□□□□ -1.33
BRCC3-208ENST00000453705 ZNF391Q9UJN7 358 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms