RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 C5orf34Q96MH7 638 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 CMKLR1Q99788 373 aa11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 CHTOPQ9Y3Y2 248 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-204ENST00000449372 A6NIZ1 184 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 LYL1P12980 280 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 GP1BBP13224 206 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 FHITP49789 147 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 RAP1BP61224 184 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 RAB35Q15286 201 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 DPY19L4Q7Z388 723 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAM210BQ96KR6 192 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 SMIM3Q9BZL3 60 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAM171A2A8MVW0 826 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF264O43296 627 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 CDC14BO60729 498 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 PGCP20142 388 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 THBS4P35443 961 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 GPR3P46089 330 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 ARRB1P49407 418 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 PLAURQ03405 335 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF684Q5T5D7 378 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 LINC01590Q5TEZ4 76 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 FBXW9Q5XUX1 488 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR10A7Q8NGE5 316 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 MRGPRFQ96AM1 343 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 URM1Q9BTM9 101 aaKnown RBP11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAAP24Q9BTP7 215 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 LANCL2Q9NS86 450 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 LUZP4Q9P127 313 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 A0A087WWC5 75 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 A0A1W2PPQ1 181 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 GABRA4P48169 554 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 HHEXQ03014 270 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 TEX38Q6PEX7 206 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 BTNL3Q6UXE8 466 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF705AQ6ZN79 300 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 MED25Q71SY5 747 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF761Q86XN6 746 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 DTWD2Q8NBA8 298 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 RNF128Q8TEB7 428 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 LPAR2Q9HBW0 351 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 GSKIPQ9P0R6 139 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF346Q9UL40 294 aaKnown RBP11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 PRH1P02810 166 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 CST2P09228 141 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 GIMD1P0DJR0 217 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR5H8P0DN80 308 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 FSTP19883 344 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 CDKN2AP42771 156 aaKnown RBP11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAM3AP98173 230 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 C1orf61Q13536 156 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 ARL6IP1Q15041 203 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 PRTGQ2VWP7 1150 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR13C3Q8NGS6 347 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 RLN3Q8WXF3 142 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 SLC25A44Q96H78 314 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 UBE2ZQ9H832 354 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 MMP25Q9NPA2 562 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 CLDN16Q9Y5I7 305 aa11.92□□□□□ -0.5
SYNGAP1-204ENST00000449372 ARID1AO14497 2285 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 TRAV36DV7A0A075B6V5 113 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 K7EPK0 472 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 CT62P0C5K7 136 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 FASLGP48023 281 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 DCAF7P61962 342 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 DLK1P80370 383 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 PSG6Q00889 435 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR5I1Q13606 314 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 FAM71E2Q8N5Q1 922 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 MCHR2Q969V1 340 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 KLK13Q9UKR3 277 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 PADI1Q9ULC6 663 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 SPEGQ15772 3267 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 TMEM265A0A087WTH1 108 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 A8MXE2 369 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 HSBP1L1C9JCN9 74 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 NUDT14O95848 222 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 CD82P27701 267 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 GALNSP34059 522 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 RNF151Q2KHN1 245 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 DGAT2L6Q6ZPD8 337 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 KLHDC7BQ96G42 594 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 VSTM2LQ96N03 204 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 AHSA1O95433 338 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 TK1P04183 234 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 PNLIPP16233 465 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 DOK4Q8TEW6 326 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 RARRES2Q99969 163 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 METTL8Q9H825 291 aaKnown RBP11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 FBXL17Q9UF56 701 aa11.91□□□□□ -0.5
SYNGAP1-204ENST00000449372 VCANP13611 3396 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 FITM1A5D6W6 292 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 DHRS7CA6NNS2 312 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 TMEM150CB9EJG8 249 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 IL12BP29460 328 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 MEP1BQ16820 701 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR1N1Q8NGS0 311 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 SYT3Q9BQG1 590 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms