RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 SAMD10Q9BYL1 202 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 LINC00470Q9BZP3 86 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 OR10A2Q9H208 303 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 CDC42EP4Q9H3Q1 356 aaKnown RBP2.4□□□□□ -2.03
UBBP3-201ENST00000445497 CST9LQ9H4G1 147 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 VSIRQ9H7M9 311 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 PTGES2Q9H7Z7 377 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 A4GALTQ9NPC4 353 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 ACER3Q9NUN7 267 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 LAMTOR3Q9UHA4 124 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 NAT8BQ9UHF3 227 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 FBXL2Q9UKC9 423 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 ERG28Q9UKR5 140 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 POMT2Q9UKY4 750 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 SNX12Q9UMY4 172 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 LAMP3Q9UQV4 416 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 PPP2R2CQ9Y2T4 447 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 KLHDC2Q9Y2U9 406 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 CARHSP1Q9Y2V2 147 aaKnown RBP2.4□□□□□ -2.03
UBBP3-201ENST00000445497 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.4□□□□□ -2.03
UBBP3-201ENST00000445497 AP4S1Q9Y587 144 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 SNX11Q9Y5W9 270 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 NEDD4P46934 1319 aa2.4□□□□□ -2.03
UBBP3-201ENST00000445497 MED14O60244 1454 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 GRIN2BQ13224 1484 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 METP08581 1390 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ABCA10Q8WWZ4 1543 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 A0A087WX48 190 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 A0A0A0MQY5 61 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 A0A0J9YY10 115 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 A0A1B0GX78 115 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 TMEM72A0PK05 275 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 C15orf61A6NNL5 157 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 NEURL1BA8MQ27 555 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 TRIM49D1C9J1S8 452 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF587BE7ETH6 402 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 H7C1C5 153 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 J3KT08 172 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 M0R1B8 84 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 M0R2Z0 102 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 TNFRSF13BO14836 293 aaPredicted RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 MRPS12O15235 138 aaKnown RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RBFOX2O43251 390 aaKnown RBP eCLIP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 HOXA3O43365 443 aaPredicted RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 PPIHO43447 177 aaKnown RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RAMP2O60895 175 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 MMP23AO75900 390 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 WISP1O95388 367 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 NRASP01111 189 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 TTRP02766 147 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 PLA2G1BP04054 148 aaKnown RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SEMG1P04279 462 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 LGALS2P05162 132 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 CTSLP07711 333 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SP1P08047 785 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 IL3P08700 152 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ADRA2AP08913 450 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 GKN3PP0CG01 181 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 CYBAP13498 195 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SDC1P18827 310 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ATF1P18846 271 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 FSTP19883 344 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 CA6P23280 308 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 NPY1RP25929 384 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 PCSK6P29122 969 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ELK3P41970 407 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 GZMMP51124 257 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ISL1P61371 349 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 PPP1CBP62140 327 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 NCS1P62166 190 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 LCN6P62502 163 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 CX3CL1P78423 397 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 CDK6Q00534 326 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SP4Q02446 784 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 GNA12Q03113 381 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 UBE2V2Q15819 145 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 NEDD8Q15843 81 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 C4orf26Q17RF5 130 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 CR1LQ2VPA4 569 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 TPTE2P1Q5T6R2 138 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 EIF5AL1Q6IS14 154 aaKnown RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 NANOGP8Q6NSW7 305 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ANKRD54Q6NXT1 300 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 FBXL22Q6P050 247 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SHC4Q6S5L8 630 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ARL9Q6T311 187 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ADAMTSL5Q6ZMM2 481 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RNF165Q6ZSG1 346 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 LCNL1Q6ZST4 164 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 MOB1BQ7L9L4 216 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 MRGPRGQ86SM5 289 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 BEST3Q8N1M1 668 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 OR2L13Q8N349 312 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 MUC15Q8N387 334 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 TMEM151AQ8N4L1 468 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 KRTCAP2Q8N6L1 136 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 GVQW1Q8N7I0 195 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 B3GALNT2Q8NCR0 500 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ADAD2Q8NCV1 583 aaKnown RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 MDS2Q8NDY4 140 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms