RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 E9PLN8 166 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 ADAP1O75689 374 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 CST2P09228 141 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 FCGR2AP12318 317 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 PMELP40967 661 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 SSR4P51571 173 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 CNN3Q15417 329 aaKnown RBP11.96□□□□□ -0.5
COL6A3-207ENST00000433762 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 LYSMD4Q5XG99 296 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 LCN10Q6JVE6 187 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 SGPP2Q8IWX5 399 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 GPR137CQ8N3F9 429 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 OR10Z1Q8NGY1 313 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 OR10C1Q96KK4 312 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 CNTNAP3Q9BZ76 1288 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 IL36GQ9NZH8 169 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 OR5AC2Q9NZP5 309 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 PIGLQ9Y2B2 252 aa11.96□□□□□ -0.5
COL6A3-207ENST00000433762 CRYM-AS1A6NIL9 109 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 CST4P01036 141 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 HEXAP06865 529 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 ANOS1P23352 680 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 RAB32Q13637 225 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 C1QL2Q7Z5L3 287 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 TECTBQ96PL2 329 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 PIGQQ9BRB3 760 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 METTL9Q9H1A3 318 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 RGCCQ9H4X1 137 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 PLEKHA2Q9HB19 425 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 KLF2Q9Y5W3 355 aaPredicted RBP11.95□□□□□ -0.5
COL6A3-207ENST00000433762 DNAH14Q0VDD8 3507 aa11.95□□□□□ -0.5
COL6A3-207ENST00000433762 FAM74A7A6NL05 159 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 ZIC3O60481 467 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 CBR3O75828 277 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 JTBO76095 146 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 ACTL6AO96019 429 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 FAHP16930 419 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 SERPINA2P20848 420 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 GLRA1P23415 457 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 SULT1A2P50226 295 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 MST1LQ2TV78 715 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 FAM74A3Q4VXF1 159 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 DHRS11Q6UWP2 260 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 SEMA6DQ8NFY4 1073 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 GALNT14Q96FL9 552 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 ULBP2Q9BZM5 246 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 PMS2P1A4D2B8 440 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 MSGN1A6NI15 193 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 F5H5K5 113 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 IFNA21P01568 189 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 OPN1LWP04000 364 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 KLK3P07288 261 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-207ENST00000433762 COX6A1P12074 109 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 PTGER4P35408 488 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 CAV2P51636 162 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 RBM39Q14498 530 aaKnown RBP11.94□□□□□ -0.5
COL6A3-207ENST00000433762 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 PHYHD1Q5SRE7 291 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 PRAMEF20Q5VT98 475 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 TMEM42Q69YG0 159 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 LHFPL2Q6ZUX7 228 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 PUSL1Q8N0Z8 303 aaKnown RBP11.94□□□□□ -0.5
COL6A3-207ENST00000433762 ESX1Q8N693 406 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 FNDC9Q8TBE3 224 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 KCNE4Q8WWG9 221 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 LIN37Q96GY3 246 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-207ENST00000433762 PROK2Q9HC23 129 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 PLEKHJ1Q9NW61 149 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 ANXA10Q9UJ72 324 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 DKKL1Q9UK85 242 aa11.94□□□□□ -0.5
COL6A3-207ENST00000433762 OR5H15A6NDH6 313 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 C19orf67A6NJJ6 358 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 IGHEP01854 428 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 SERPINA5P05154 406 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 ADCYAP1P18509 176 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 TMEM268Q5VZI3 342 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 RPUSD3Q6P087 351 aaKnown RBP11.93□□□□□ -0.5
COL6A3-207ENST00000433762 ZIC4Q8N9L1 334 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 OR4A4PQ8NGN8 299 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 ZNF385AQ96PM9 386 aaKnown RBP11.93□□□□□ -0.5
COL6A3-207ENST00000433762 PARP11Q9NR21 331 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 UQCC1Q9NVA1 299 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 PLEK2Q9NYT0 353 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 ZNF705EA8MWA4 302 aaPredicted RBP11.93□□□□□ -0.5
COL6A3-207ENST00000433762 C9J4A7 227 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 H7C2Y5 167 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 TERTO14746 1132 aaKnown RBP11.93□□□□□ -0.5
COL6A3-207ENST00000433762 SYNGR3O43761 229 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 DEDDO75618 318 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 HTR3BO95264 441 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 HKR1P10072 659 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 KLK2P20151 261 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 RAC3P60763 192 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 RAET1LQ5VY80 246 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 GALNTL5Q7Z4T8 443 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 COMMD1Q8N668 190 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 CPT1CQ8TCG5 803 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 SGK3Q96BR1 496 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms