RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-205	ENST00000433369	DNAJB11	Q9UBS4	358 aa		10.44	□□□□□ -0.74
PTPN12-205	ENST00000433369	ENPP5	Q9UJA9	477 aa		10.44	□□□□□ -0.74
PTPN12-205	ENST00000433369	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.44	□□□□□ -0.74
PTPN12-205	ENST00000433369	SNX5	Q9Y5X3	404 aa		10.44	□□□□□ -0.74
PTPN12-205	ENST00000433369	IGKV1D-17	A0A075B6S4	117 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	CENPVL3	A0A0U1RRI6	287 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	TMEM89	A2RUT3	159 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	EBAG9	O00559	213 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	TOX4	O94842	621 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	KRT8	P05787	483 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	GABRB1	P18505	474 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	CCL1	P22362	96 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	GLRA1	P23415	457 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	KIR3DL2	P43630	455 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	DEFB112	Q30KQ8	113 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	ZBTB37	Q5TC79	503 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	ZNF788	Q6ZQV5	615 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	PDZD9	Q8IXQ8	264 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	RDH10	Q8IZV5	341 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	LY6G5B	Q8NDX9	201 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	C12orf43	Q96C57	262 aa	Known RBP	10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	RNFT2	Q96EX2	444 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	JMJD8	Q96S16	334 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	ELL3	Q9HB65	397 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	ACOXL	Q9NUZ1	547 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	IMPAD1	Q9NX62	359 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	NLK	Q9UBE8	527 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	ZNF222	Q9UK12	451 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	DSCAML1	Q8TD84	2053 aa		10.43	□□□□□ -0.74
PTPN12-205	ENST00000433369	PQLC2L	A1A4F0	135 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	OR5B21	A6NL26	309 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	OR2AT4	A6NND4	320 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	MTRF1	O75570	445 aa	Known RBP	10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	PSG2	P11465	335 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	PRTN3	P24158	256 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	ATP6V1E1	P36543	226 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	MTNR1A	P48039	350 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	SNRPG	P62308	76 aa	Known RBP	10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	BAMBI	Q13145	260 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	TMED1	Q13445	227 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	SLC9A3R2	Q15599	337 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	SLC25A30	Q5SVS4	291 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	CLVS2	Q5SYC1	327 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	C12orf54	Q6X4T0	127 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	SLC36A1	Q7Z2H8	476 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	PQLC1	Q8N2U9	271 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	PNLDC1	Q8NA58	520 aa	Known RBP	10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	ZNRF1	Q8ND25	227 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	TRUB1	Q8WWH5	349 aa	Known RBP	10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	RFK	Q969G6	155 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	CNTD2	Q9H8S5	307 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	GNG8	Q9UK08	70 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	MAB21L2	Q9Y586	359 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	ORC6	Q9Y5N6	252 aa		10.42	□□□□□ -0.74
PTPN12-205	ENST00000433369	IGKV1-27	A0A075B6S5	117 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	DLGAP1	O14490	977 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	SIGLEC5	O15389	551 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	NDUFB3	O43676	98 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	SULT1C4	O75897	302 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	ECD	O95905	644 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	LIPF	P07098	398 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	ACAA1	P09110	424 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	CFP	P27918	469 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	HAAO	P46952	286 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	GABRA2	P47869	451 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	CEBPD	P49716	269 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	COMP	P49747	757 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	OR12D2	P58182	307 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	NANOS3	P60323	173 aa	Known RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	UBE2V2	Q15819	145 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	OCLN	Q16625	522 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	GPR157	Q5UAW9	335 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	METTL11B	Q5VVY1	283 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	RBMS3	Q6XE24	437 aa	Known RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	ACP7	Q6ZNF0	438 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	VMO1	Q7Z5L0	202 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	ANGPTL5	Q86XS5	388 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	CALHM1	Q8IU99	346 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	ENTHD1	Q8IYW4	607 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369		Q8N7P7	452 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	NPRL2	Q8WTW4	380 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	H1FX	Q92522	213 aa	Known RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	GCDH	Q92947	438 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	LHX4	Q969G2	390 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	LGALS12	Q96DT0	336 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	DCTN5	Q9BTE1	182 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	ONECUT1	Q9UBC0	465 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	GMPPB	Q9Y5P6	360 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	NBEAL1	Q6ZS30	2694 aa		10.41	□□□□□ -0.74
PTPN12-205	ENST00000433369	LOC107986453	A0A1B0GWG9	222 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369	NKX6-3	A6NJ46	265 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369	RFPL4A	A6NLU0	287 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369	RFPL4AL1	F8VTS6	287 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369		F8VVB4	439 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369		F8VWA3	439 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369		J3QT63	122 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369	SYT7	O43581	403 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369	PGA5	P0DJD9	388 aa		10.4	□□□□□ -0.74
PTPN12-205	ENST00000433369	IL13RA1	P78552	427 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms