RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 ZNF319Q9P2F9 582 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 TMEM131Q92545 1883 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 M0R296 226 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 HLA-HP01893 362 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 RNF224P0DH78 156 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 HIST1H1DP16402 221 aaKnown RBP10.03□□□□□ -0.8
CLDN4-202ENST00000431918 FSTP19883 344 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 ATP1B3P54709 279 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 SPEM2Q0P670 501 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 SULF2Q8IWU5 870 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 OR1F12Q8NHA8 337 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 FNDC9Q8TBE3 224 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 CPT1CQ8TCG5 803 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 PAQR8Q8TEZ7 354 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 PPP1R1CQ8WVI7 109 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 CXorf58Q96LI9 332 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 SSX3Q99909 188 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 SLC26A1Q9H2B4 701 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 KCNK7Q9Y2U2 307 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 LSM5Q9Y4Y9 91 aaKnown RBP10.03□□□□□ -0.8
CLDN4-202ENST00000431918 TIMM10BQ9Y5J6 103 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 A0A0A6YYH2 397 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 A6NJ64 397 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 MT-CO3P00414 261 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 GABRA1P14867 456 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 SERPINF1P36955 418 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 AIMP2Q13155 320 aaKnown RBP10.03□□□□□ -0.8
CLDN4-202ENST00000431918 RNF144BQ7Z419 303 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 TMEM105Q8N8V8 129 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 NDRG3Q9UGV2 375 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 MEMO1Q9Y316 297 aa10.03□□□□□ -0.8
CLDN4-202ENST00000431918 C5orf49A4QMS7 147 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 ZIC3O60481 467 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 NRASP01111 189 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 ISG15P05161 165 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 RBP2P50120 134 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 CCL11P51671 97 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 RAB5BP61020 215 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 C2orf68Q2NKX9 166 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 PHYHD1Q5SRE7 291 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 ZNF385CQ66K41 422 aaPredicted RBP10.02□□□□□ -0.8
CLDN4-202ENST00000431918 PPP1R32Q7Z5V6 425 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 KCNE4Q8WWG9 221 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 MRPL13Q9BYD1 178 aaKnown RBP10.02□□□□□ -0.8
CLDN4-202ENST00000431918 PARPBPQ9NWS1 579 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 OPN4Q9UHM6 478 aa10.02□□□□□ -0.8
CLDN4-202ENST00000431918 A0A0B4J2A0 478 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 LNP1A1A4G5 178 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 ZNF587BE7ETH6 402 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 UBBP0CG47 229 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 MEX3BQ6ZN04 569 aaKnown RBP10.02□□□□□ -0.81
CLDN4-202ENST00000431918 PRR18Q8N4B5 295 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 CNEP1R1Q8N9A8 125 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 LURAP1Q96LR2 239 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 ZNF251Q9BRH9 671 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 SMIM3Q9BZL3 60 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 SHPKQ9UHJ6 478 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 KIF25Q9UIL4 384 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 KCNIP3Q9Y2W7 256 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 MCRIP1C9JLW8 97 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 HOXC12P31275 282 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 TAS2R31P59538 309 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 PHLDA2Q53GA4 152 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 C9orf152Q5JTZ5 239 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 TIPARPQ7Z3E1 657 aaKnown RBP10.02□□□□□ -0.81
CLDN4-202ENST00000431918 STPG2Q8N412 459 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 ZNF565Q8N9K5 539 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 TMPRSS13Q9BYE2 586 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 GSN-AS1Q9NRJ2 163 aa10.02□□□□□ -0.81
CLDN4-202ENST00000431918 NCOA6Q14686 2063 aaPredicted RBP10.01□□□□□ -0.81
CLDN4-202ENST00000431918 RAB6AP20340 208 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 DUSP1P28562 367 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 MAGEA5P43359 124 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 KCNJ3P48549 501 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 H2BFSP57053 126 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 LSM6P62312 80 aaKnown RBP10.01□□□□□ -0.81
CLDN4-202ENST00000431918 UNC119Q13432 240 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 HES3Q5TGS1 186 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 TFAP2EQ6VUC0 442 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 TMPRSS7Q7RTY8 843 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 SPICQ8N5J4 248 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 OR51F2Q8NH61 342 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 TERB2Q8NHR7 220 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 S100PBPQ96BU1 408 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 LRP4O75096 1905 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 LY86O95711 162 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 CD46P15529 392 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 TAS2R46P59540 309 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 ARF1P84077 181 aaKnown RBP10.01□□□□□ -0.81
CLDN4-202ENST00000431918 SSBP1Q04837 148 aaKnown RBP10.01□□□□□ -0.81
CLDN4-202ENST00000431918 PABPC1L2AQ5JQF8 200 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 C1orf100Q5SVJ3 147 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 SLC23A3Q6PIS1 610 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 SLC25A26Q70HW3 274 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 LYG2Q86SG7 212 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 SGPP2Q8IWX5 399 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 CA5BP1Q8WTZ4 195 aa10.01□□□□□ -0.81
CLDN4-202ENST00000431918 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
CLDN4-202ENST00000431918 APH1AQ96BI3 265 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms