RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 CPT2P23786 658 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 HAAOP46952 286 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 ATP1B3P54709 279 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 GABARAPL2P60520 117 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 YIF1BQ5BJH7 314 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 FAM201AQ5SY85 155 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 HAGHLQ6PII5 290 aaPredicted RBP11.5□□□□□ -0.57
VPREB1-202ENST00000403807 PARP16Q8N5Y8 322 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 DNAAF1Q8NEP3 725 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 TRMT10AQ8TBZ6 339 aaKnown RBP11.5□□□□□ -0.57
VPREB1-202ENST00000403807 BORCS8Q96FH0 119 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 OR5M11Q96RB7 305 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 SMR3AQ99954 134 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 GSX1Q9H4S2 264 aaPredicted RBP11.5□□□□□ -0.57
VPREB1-202ENST00000403807 METTL17Q9H7H0 456 aaPredicted RBP11.5□□□□□ -0.57
VPREB1-202ENST00000403807 ZNF665Q9H7R5 613 aa11.5□□□□□ -0.57
VPREB1-202ENST00000403807 PNMA8CA0A1B0GUJ8 204 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 OOEPA6NGQ2 149 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 NDUFA2O43678 99 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 CD5LO43866 347 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 ALX3O95076 343 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 IGHV2-5P01817 119 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 IGHV4-31P0DP07 118 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 IL2RGP31785 369 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 SOX2P48431 317 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 RBP2P50120 134 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 GPR50Q13585 617 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 ZNF404Q494X3 552 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 SFRP4Q6FHJ7 346 aaPredicted RBP11.49□□□□□ -0.57
VPREB1-202ENST00000403807 LINC01356Q8N9X3 169 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 NPRL2Q8WTW4 380 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 AQP3Q92482 292 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 RGP1Q92546 391 aaPredicted RBP11.49□□□□□ -0.57
VPREB1-202ENST00000403807 SPSB1Q96BD6 273 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 C1orf159Q96HA4 380 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 PGLYRP3Q96LB9 341 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 PATZ1Q9HBE1 687 aaKnown RBP11.49□□□□□ -0.57
VPREB1-202ENST00000403807 ISYNA1Q9NPH2 558 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 MIOXQ9UGB7 285 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 POLDIP2Q9Y2S7 368 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 LSM2Q9Y333 95 aaKnown RBP11.49□□□□□ -0.57
VPREB1-202ENST00000403807 LRRC42Q9Y546 428 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 HIVEP1P15822 2718 aa11.49□□□□□ -0.57
VPREB1-202ENST00000403807 IGKV1-9A0A0C4DH69 117 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 SRRM5B3KS81 715 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 B4DSR2 109 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 C3orf80F5H4A9 247 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 J3QT63 122 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 MAGEB3O15480 346 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 AKR7A2O43488 359 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 RHBDL1O75783 438 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 TGFAP01135 160 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 HSMCR30P0CW71 290 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 MUC1P15941 1255 aaPredicted RBP11.48□□□□□ -0.57
VPREB1-202ENST00000403807 GLRA1P23415 457 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 AZGP1P25311 298 aaKnown RBP11.48□□□□□ -0.57
VPREB1-202ENST00000403807 CD80P33681 288 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 MAP2K4P45985 399 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 MTCP1P56278 107 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 MICBQ29980 383 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 Q499Y3 187 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 TEX36Q5VZQ5 186 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 DCDC5Q6ZRR9 648 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 LHFPL2Q6ZUX7 228 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 SVOPQ8N4V2 548 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 MS4A15Q8N5U1 240 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 C19orf18Q8NEA5 215 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 OR13C9Q8NGT0 318 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 UFD1Q92890 307 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 TMEM106AQ96A25 262 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 MSI2Q96DH6 328 aaKnown RBP11.48□□□□□ -0.57
VPREB1-202ENST00000403807 PKIBQ9C010 78 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 DNAJB11Q9UBS4 358 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 TANC2Q9HCD6 1990 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 CELSR1Q9NYQ6 3014 aa11.48□□□□□ -0.57
VPREB1-202ENST00000403807 TRBV5-5A0A0J9YX44 114 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 CEACAM18A8MTB9 384 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 SULT1B1O43704 296 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 WNT2P09544 360 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 EGR1P18146 543 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 RAB3AP20336 220 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
VPREB1-202ENST00000403807 IL24Q13007 206 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 TBCEQ15813 527 aaPredicted RBP11.47□□□□□ -0.57
VPREB1-202ENST00000403807 ANGPTL5Q86XS5 388 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 THRSPQ92748 146 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 C12orf43Q96C57 262 aaKnown RBP11.47□□□□□ -0.57
VPREB1-202ENST00000403807 OPALINQ96PE5 141 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 RASL12Q9NYN1 266 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 FLNAP21333 2647 aaKnown RBP11.47□□□□□ -0.57
VPREB1-202ENST00000403807 F8P00451 2351 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 MED13LQ71F56 2210 aa11.47□□□□□ -0.57
VPREB1-202ENST00000403807 ZNF879B4DU55 563 aa11.46□□□□□ -0.57
VPREB1-202ENST00000403807 FAM157AC9JC47 383 aa11.46□□□□□ -0.57
VPREB1-202ENST00000403807 SYNGR1O43759 233 aa11.46□□□□□ -0.57
VPREB1-202ENST00000403807 NOS1APO75052 506 aaPredicted RBP11.46□□□□□ -0.57
VPREB1-202ENST00000403807 CYB5AP00167 134 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms