RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 CD1AP06126 327 aa21.39■■□□□ 1.01
U2AF1-203ENST00000398137 PCMT1P22061 227 aa21.39■■□□□ 1.01
U2AF1-203ENST00000398137 PMELP40967 661 aa21.39■■□□□ 1.01
U2AF1-203ENST00000398137 RPS11P62280 158 aaKnown RBP eCLIP21.39■■□□□ 1.01
U2AF1-203ENST00000398137 ZNF154Q13106 437 aa21.39■■□□□ 1.01
U2AF1-203ENST00000398137 UBE2V2Q15819 145 aa21.39■■□□□ 1.01
U2AF1-203ENST00000398137 TRMT10AQ8TBZ6 339 aaKnown RBP21.39■■□□□ 1.01
U2AF1-203ENST00000398137 BEX2Q9BXY8 128 aa21.39■■□□□ 1.01
U2AF1-203ENST00000398137 ISYNA1Q9NPH2 558 aa21.39■■□□□ 1.01
U2AF1-203ENST00000398137 C1orf123Q9NWV4 160 aa21.39■■□□□ 1.01
U2AF1-203ENST00000398137 OR5B21A6NL26 309 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 TMEM210A6NLX4 147 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 ZNF732B4DXR9 585 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 CLDN25C9JDP6 229 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 PPIHO43447 177 aaKnown RBP21.38■■□□□ 1.01
U2AF1-203ENST00000398137 SERPINA3P01011 423 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 GNG3P63215 75 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 FAM120AOSQ5T036 256 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 ZNF826PQ6ZT77 177 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 UTS2BQ765I0 119 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 OR5A2Q8NGI9 324 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 OR13C9Q8NGT0 318 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 SPATA3Q8NHX4 192 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 TMED9Q9BVK6 235 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 ZNF696Q9H7X3 374 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 KCNS2Q9ULS6 477 aa21.38■■□□□ 1.01
U2AF1-203ENST00000398137 DYSFO75923 2080 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 CYB5R3P00387 301 aaPredicted RBP21.37■■□□□ 1.01
U2AF1-203ENST00000398137 TGFAP01135 160 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 IFNA2P01563 188 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 CD2P06729 351 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 GPR6P46095 362 aaPredicted RBP21.37■■□□□ 1.01
U2AF1-203ENST00000398137 TPBGQ13641 420 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 UBE2UQ5VVX9 321 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 PARP16Q8N5Y8 322 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 OR11L1Q8NGX0 322 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 Q8TCH9 128 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 RPL3LQ92901 407 aaKnown RBP21.37■■□□□ 1.01
U2AF1-203ENST00000398137 ERGIC1Q969X5 290 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 TMEM106AQ96A25 262 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 C1orf159Q96HA4 380 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 OR14A2Q96R54 314 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 SHARPINQ9H0F6 387 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 LPAR3Q9UBY5 353 aa21.37■■□□□ 1.01
U2AF1-203ENST00000398137 IGKV1-9A0A0C4DH69 117 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 FAM230AA0A1W2PPH8 454 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 hCG_1807616A0A1W2PRN6 198 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 PQLC2LA1A4F0 135 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 CPEP16870 476 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 ATF1P18846 271 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 CNN3Q15417 329 aaKnown RBP21.36■■□□□ 1.01
U2AF1-203ENST00000398137 Q499Y3 187 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 AVPI1Q5T686 147 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 PHC2Q8IXK0 858 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 TSPAN14Q8NG11 270 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 FCGR1BQ92637 280 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 TECTBQ96PL2 329 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 TLNRD1Q9H1K6 362 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 ZCCHC4Q9H5U6 513 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 TAS2R4Q9NYW5 299 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 SLC7A11Q9UPY5 501 aa21.36■■□□□ 1.01
U2AF1-203ENST00000398137 LRRC30A6NM36 301 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 IFNL4K9M1U5 179 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 WNT9BO14905 357 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 PSMB9P28065 219 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 TMEM33P57088 247 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 RPS25P62851 125 aaKnown RBP21.35■■□□□ 1.01
U2AF1-203ENST00000398137 GPR50Q13585 617 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 INSL4Q14641 139 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 ARMCX4Q5H9R4 360 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 SERPINA12Q8IW75 414 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 C11orf53Q8IXP5 236 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 SCCPDHQ8NBX0 429 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 HPS1Q92902 700 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 TMEM203Q969S6 136 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 ORAI1Q96D31 301 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 OR51I2Q9H344 312 aa21.35■■□□□ 1.01
U2AF1-203ENST00000398137 TMEM178BH3BS89 294 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 PHF1O43189 567 aaPredicted RBP21.34■■□□□ 1.01
U2AF1-203ENST00000398137 INMTO95050 263 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 OCMP0CE72 109 aaPredicted RBP21.34■■□□□ 1.01
U2AF1-203ENST00000398137 IRF2P14316 349 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 AZGP1P25311 298 aaKnown RBP21.34■■□□□ 1.01
U2AF1-203ENST00000398137 HOXA4Q00056 320 aaPredicted RBP21.34■■□□□ 1.01
U2AF1-203ENST00000398137 NEDD8Q15843 81 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 ZNF181Q2M3W8 571 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 FAM76BQ5HYJ3 339 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 ASPHD2Q6ICH7 369 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 BOLLQ8N9W6 283 aaKnown RBP21.34■■□□□ 1.01
U2AF1-203ENST00000398137 OR5D14Q8NGL3 314 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 TIMD4Q96H15 378 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 WIPI2Q9Y4P8 454 aa21.34■■□□□ 1.01
U2AF1-203ENST00000398137 ZNF879B4DU55 563 aa21.33■■□□□ 1.01
U2AF1-203ENST00000398137 CDIPTO14735 213 aa21.33■■□□□ 1.01
U2AF1-203ENST00000398137 SSX1Q16384 188 aa21.33■■□□□ 1.01
U2AF1-203ENST00000398137 CR1LQ2VPA4 569 aa21.33■■□□□ 1.01
U2AF1-203ENST00000398137 FAM201AQ5SY85 155 aa21.33■■□□□ 1.01
U2AF1-203ENST00000398137 HAGHLQ6PII5 290 aaPredicted RBP21.33■■□□□ 1.01
U2AF1-203ENST00000398137 WDR82Q6UXN9 313 aa21.33■■□□□ 1.01
U2AF1-203ENST00000398137 MS4A15Q8N5U1 240 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms