RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CCDC85CA6NKD9 419 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 KIR2DS3K7RE56 304 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 CD37P11049 281 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 AGAP20933 346 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 EIF2S3P41091 472 aaKnown RBP12.6□□□□□ -0.39
CLIP2-203ENST00000395060 GABRA4P48169 554 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 CLRN1P58418 232 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 KIR2DS5Q14953 304 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 HAGHQ16775 308 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 C4orf17Q53FE4 359 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 RPUSD3Q6P087 351 aaKnown RBP12.6□□□□□ -0.39
CLIP2-203ENST00000395060 DNM1P34Q6PK57 102 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 LYZL2Q7Z4W2 148 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 ARRDC1Q8N5I2 433 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 LMX1AQ8TE12 382 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 WWTR1Q9GZV5 400 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 CUTCQ9NTM9 273 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 MCTS1Q9ULC4 181 aaKnown RBP12.6□□□□□ -0.39
CLIP2-203ENST00000395060 IGKV1-9A0A0C4DH69 117 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 NUDT19A8MXV4 375 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 OR2C1O95371 312 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 RNF224P0DH78 156 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 FCGR2AP12318 317 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 RPS2P15880 293 aaKnown RBP12.6□□□□□ -0.39
CLIP2-203ENST00000395060 S100PP25815 95 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 SNCAP37840 140 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 ARL4DP49703 201 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 FOXF1Q12946 379 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 FZD2Q14332 565 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 PCK2Q16822 640 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 GFI1BQ5VTD9 330 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 TMEM268Q5VZI3 342 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 Q7L0L9 218 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 DTX1Q86Y01 620 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 LRRC18Q8N456 261 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 TMEM156Q8N614 296 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 S100A13Q99584 98 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF700Q9H0M5 742 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 COPS7AQ9UBW8 275 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF850A8MQ14 1090 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 ALG1L2C9J202 215 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 RAB2AP61019 212 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 TLE1Q04724 770 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 H1FNTQ75WM6 255 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-203ENST00000395060 PTX4Q96A99 478 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 C1orf147Q96MC9 270 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-203ENST00000395060 CCNL2Q96S94 520 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-203ENST00000395060 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 LRRC61Q9BV99 259 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 RNF122Q9H9V4 155 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 PARP11Q9NR21 331 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 LHFPL6Q9Y693 200 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 ATG2AQ2TAZ0 1938 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 AP4M1O00189 453 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 TNFRSF10CO14798 259 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 NPIPB7O75200 414 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 IFNA21P01568 189 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 MDKP21741 143 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-203ENST00000395060 EIF5AP63241 154 aaKnown RBP12.59□□□□□ -0.39
CLIP2-203ENST00000395060 CCL20P78556 96 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 C5orf24Q7Z6I8 188 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 LURAP1LQ8IV03 231 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 ZFP62Q8NB50 900 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-203ENST00000395060 OCSTAMPQ9BR26 566 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 URM1Q9BTM9 101 aaKnown RBP12.59□□□□□ -0.39
CLIP2-203ENST00000395060 PRO1933Q9H354 126 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 FAM212BQ9NTI7 297 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-203ENST00000395060 PLEKHJ1Q9NW61 149 aa12.59□□□□□ -0.39
CLIP2-203ENST00000395060 ZNHIT1O43257 154 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 JTBO76095 146 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 IGHV2-70P01814 119 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 MBPP02686 304 aaPredicted RBP12.58□□□□□ -0.4
CLIP2-203ENST00000395060 IGFBP4P22692 258 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 LTBRP36941 435 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 RGS19P49795 217 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 PIGPP57054 158 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 TAF9Q16594 264 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 FAM69BQ5VUD6 431 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 SGPP2Q8IWX5 399 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 ZNF383Q8NA42 475 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 OR56B1Q8NGI3 324 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 S100PBPQ96BU1 408 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 TCTN2Q96GX1 697 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 C1orf123Q9NWV4 160 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 IGKV3-11P04433 115 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 CHRM2P08172 466 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 OR5AC1P0C628 307 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 KISS1Q15726 138 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 HIST2H3AQ71DI3 136 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 OR52M1Q8NGK5 317 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 OR11L1Q8NGX0 322 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 FAAP24Q9BTP7 215 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 TOLLIPQ9H0E2 274 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 C19orf12Q9NSK7 152 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 SRPK3Q9UPE1 567 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 OSGIN2Q9Y236 505 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 TRIOBPQ9H2D6 2365 aa12.58□□□□□ -0.4
CLIP2-203ENST00000395060 FAM186AA6NE01 2351 aa12.57□□□□□ -0.4
CLIP2-203ENST00000395060 CXorf65A6NEN9 183 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms