RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ARHGEF39Q8N4T4 335 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 OR4F5Q8NH21 305 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 ZNRF4Q8WWF5 429 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 OR4F4Q96R69 305 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 OR14J1Q9UGF5 321 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 RBFOX3A6NFN3 312 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 FRG2CA6NGY1 282 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 A8MXE2 369 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 GEMIN2O14893 280 aaKnown RBP12.69□□□□□ -0.38
RTF1-201ENST00000389629 HMGB3O15347 200 aaKnown RBP12.69□□□□□ -0.38
RTF1-201ENST00000389629 OR2J2O76002 312 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 IAPPP10997 89 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 ZBTB25P24278 435 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 PNLIPRP2P54317 469 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 ISXQ2M1V0 245 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.69□□□□□ -0.38
RTF1-201ENST00000389629 FGF14Q92915 247 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 C8orf33Q9H7E9 229 aaPredicted RBP12.69□□□□□ -0.38
RTF1-201ENST00000389629 HS3ST3A1Q9Y663 406 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 SHISA8B8ZZ34 492 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 CD38P28907 300 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 MRPS21P82921 87 aaKnown RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 PARP11Q9NR21 331 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 ACAA1P09110 424 aaPredicted RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 DLK1P80370 383 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 SRSF3P84103 164 aaKnown RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 SPANXN5Q5MJ07 72 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 OR5C1Q8NGR4 320 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 MRPL24Q96A35 216 aaKnown RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 IP6K3Q96PC2 410 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 PLEKHA3Q9HB20 300 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 FGF21Q9NSA1 209 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 XKRY2A2RUG3 117 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 E9PQ18 207 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 SPRY1O43609 319 aaPredicted RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 OR5AC1P0C628 307 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 CT45A8P0DMV1 189 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 CT45A9P0DMV2 189 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 RAC2P15153 192 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 HNF1AP20823 631 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 NOVA1P51513 510 aaKnown RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 NAAAQ02083 359 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 CT45A2Q5DJT8 189 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 ACER2Q5QJU3 275 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 SFTPA2Q8IWL1 248 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 PSMF1Q92530 271 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 PIGBOS1A0A0B4J2F0 54 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 CXorf65A6NEN9 183 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 H3BQ15 152 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 CELA2BP08218 269 aaPredicted RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
RTF1-201ENST00000389629 SRYQ05066 204 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 PMS2P11Q13670 270 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 PNLIPRP3Q17RR3 467 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 DBX2Q6ZNG2 339 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 IL22RA1Q8N6P7 574 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 ZSCAN4Q8NAM6 433 aaPredicted RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
RTF1-201ENST00000389629 ZNF845Q96IR2 970 aaPredicted RBP12.68□□□□□ -0.38
RTF1-201ENST00000389629 RTTNQ86VV8 2226 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 TRBV5-5A0A0J9YX44 114 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 MDFIC2A0A1B0GVS7 189 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 APOBEC1P41238 236 aaKnown RBP12.67□□□□□ -0.38
RTF1-201ENST00000389629 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.67□□□□□ -0.38
RTF1-201ENST00000389629 RPP25Q9BUL9 199 aaKnown RBP12.67□□□□□ -0.38
RTF1-201ENST00000389629 PLA2G2FQ9BZM2 168 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 KCNK7Q9Y2U2 307 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 EFSO43281 561 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 VSIG8P0DPA2 414 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 CD200P41217 278 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 GJC3Q8NFK1 279 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 PHOSPHO2Q8TCD6 241 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 SPSB2Q99619 263 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 MRPS17Q9Y2R5 130 aaKnown RBP12.67□□□□□ -0.38
RTF1-201ENST00000389629 A0A087WV48 116 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 TRAPPC2LH3BP13 241 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 ZFAND5O76080 213 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 RNF224P0DH78 156 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 TRAV14DV4A0A0A6YYC5 116 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 CDC14BO60729 498 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 GRB2P62993 217 aaKnown RBP12.67□□□□□ -0.38
RTF1-201ENST00000389629 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
RTF1-201ENST00000389629 FAM103A1Q9BTL3 118 aaKnown RBP12.67□□□□□ -0.38
RTF1-201ENST00000389629 GGACTQ9BVM4 153 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 GPR61Q9BZJ8 451 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 ADAM19Q9H013 955 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 ARV1Q9H2C2 271 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 OR51I2Q9H344 312 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 KCNIP1Q9NZI2 227 aa12.67□□□□□ -0.38
RTF1-201ENST00000389629 OR1D5P58170 312 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 CYB5R2Q6BCY4 276 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 FAAP24Q9BTP7 215 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 TMEM100Q9NV29 134 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 HSF4Q9ULV5 492 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 SERPINE3A8MV23 424 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 RER1O15258 196 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 TUSC2O75896 110 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 ZNF25P17030 456 aaPredicted RBP12.66□□□□□ -0.38
RTF1-201ENST00000389629 PMP22Q01453 160 aa12.66□□□□□ -0.38
RTF1-201ENST00000389629 KISS1Q15726 138 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms