RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 A0A1B0GTI1 187 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 DBTP11182 482 aaKnown RBP18.37■□□□□ 0.53
SRM-201ENST00000376957 HAAOP46952 286 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 IL13RA1P78552 427 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 HOXA4Q00056 320 aaPredicted RBP18.37■□□□□ 0.53
SRM-201ENST00000376957 ZNF91Q05481 1191 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 Q6ZSR3 168 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 SETD9Q8NE22 299 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 PP6455Q8WZ26 134 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 AQP3Q92482 292 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 UPRTQ96BW1 309 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 DMRTB1Q96MA1 342 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 VCXQ9H320 206 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 GPR173Q9NS66 373 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 ACOXLQ9NUZ1 547 aa18.37■□□□□ 0.53
SRM-201ENST00000376957 ANK3Q12955 4377 aaKnown RBP18.36■□□□□ 0.53
SRM-201ENST00000376957 IRGMA1A4Y4 181 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 OR2AT4A6NND4 320 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 J3QLW9 94 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 FSHBP01225 129 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 OCM2P0CE71 109 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 OCMP0CE72 109 aaPredicted RBP18.36■□□□□ 0.53
SRM-201ENST00000376957 ZNF19P17023 458 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 GABRB1P18505 474 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 HILS1P60008 231 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 GALEQ14376 348 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 RCN1Q15293 331 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 LRRC36Q1X8D7 754 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 SMIM21Q3B7S5 101 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 KRTAP24-1Q3LI83 254 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 GPR157Q5UAW9 335 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 LPCAT4Q643R3 524 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 STUMQ69YW2 141 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 BTN2A1Q7KYR7 527 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 PHC2Q8IXK0 858 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 CMTM4Q8IZR5 234 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 OR5T2Q8NGG2 359 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 LGALS12Q96DT0 336 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 SLC6A7Q99884 636 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 C19orf24Q9BVV8 132 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 NEK6Q9HC98 313 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 SNTG1Q9NSN8 517 aa18.36■□□□□ 0.53
SRM-201ENST00000376957 MXRA5Q9NR99 2828 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 ZNF879B4DU55 563 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 J3QRE1 110 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 J3QT63 122 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 TOX4O94842 621 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 GABRA2P47869 451 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 CCR9P51686 369 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 OR12D2P58182 307 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 ISL1P61371 349 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 IKZF1Q13422 519 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 CNN3Q15417 329 aaKnown RBP18.35■□□□□ 0.53
SRM-201ENST00000376957 FDX2Q6P4F2 183 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 SYS1Q8N2H4 156 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 OR2G2Q8NGZ5 317 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 C4orf36Q96KX1 117 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 ALG8Q9BVK2 526 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 WDR13Q9H1Z4 485 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 RASSF4Q9H2L5 321 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 CNTD2Q9H8S5 307 aa18.35■□□□□ 0.53
SRM-201ENST00000376957 LOC107986453A0A1B0GWG9 222 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 PQLC2LA1A4F0 135 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 C22orf46C9J442 243 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.34■□□□□ 0.53
SRM-201ENST00000376957 RHBDL1O75783 438 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 RGS9O75916 674 aaPredicted RBP18.34■□□□□ 0.53
SRM-201ENST00000376957 ISG15P05161 165 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 ZNF20P17024 532 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 FUT6P51993 359 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 FGF12P61328 243 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 MED21Q13503 144 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 PDCD1Q15116 288 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 CYGBQ8WWM9 190 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 C22orf15Q8WYQ4 148 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 DACT3Q96B18 629 aaPredicted RBP18.34■□□□□ 0.53
SRM-201ENST00000376957 PCGF1Q9BSM1 259 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 SMURF1Q9HCE7 757 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 RPUSD1Q9UJJ7 312 aaKnown RBP18.34■□□□□ 0.53
SRM-201ENST00000376957 SVEP1Q4LDE5 3571 aa18.34■□□□□ 0.53
SRM-201ENST00000376957 FAM230AA0A1W2PPH8 454 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 A6NIN4 97 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 CYB5AP00167 134 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 TGM4P49221 684 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 GBX2P52951 348 aaPredicted RBP18.33■□□□□ 0.52
SRM-201ENST00000376957 DMRTC1Q5HYR2 192 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 LHFPL3Q86UP9 236 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 PRSS35Q8N3Z0 413 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 DHRSXQ8N5I4 330 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 ZNF676Q8N7Q3 588 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 POC1AQ8NBT0 407 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 BORCS8Q96FH0 119 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 WDFY2Q96P53 400 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 PKIBQ9C010 78 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 CHST5Q9GZS9 411 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 FGF23Q9GZV9 251 aaPredicted RBP18.33■□□□□ 0.52
SRM-201ENST00000376957 COMMD4Q9H0A8 199 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 AMBNQ9NP70 447 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 FRRS1LQ9P0K9 344 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 SLC25A10Q9UBX3 287 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms