RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TOMM34Q15785 309 aaPredicted RBP11.39□□□□□ -0.59
MSH5-204ENST00000375755 SSX2Q16385 188 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 SPNS3Q6ZMD2 512 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 FAM71E2Q8N5Q1 922 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 TMEM104Q8NE00 496 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 CCDC54Q8NEL0 328 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 FGGYQ96C11 551 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 BSCL2Q96G97 398 aaPredicted RBP11.39□□□□□ -0.59
MSH5-204ENST00000375755 CNTNAP3Q9BZ76 1288 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 OCIAD1Q9NX40 245 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 R4GMQ9 66 aa11.39□□□□□ -0.59
MSH5-204ENST00000375755 IGLV1-36A0A0B4J1U3 117 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 ARGFXA6NJG6 315 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 RPS2P15880 293 aaKnown RBP11.38□□□□□ -0.59
MSH5-204ENST00000375755 CTLA4P16410 223 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 RAP1AP62834 184 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 GAMTQ14353 236 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 POMZP3Q6PJE2 187 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 RNF144BQ7Z419 303 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 ERGIC1Q969X5 290 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 PRO1933Q9H354 126 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 UNKLQ9H9P5 680 aaKnown RBP11.38□□□□□ -0.59
MSH5-204ENST00000375755 OR52A1Q9UKL2 312 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 ZFHX4Q86UP3 3567 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 FREM3P0C091 2139 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 A0A0A6YYD4 124 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 PRSS37A4D1T9 235 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 C1QL1O75973 258 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 UTS2O95399 124 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 FPR2P25090 351 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 RAB1AP62820 205 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 VAX1Q5SQQ9 334 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 TCEAL6Q6IPX3 200 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 PEG10Q86TG7 708 aaKnown RBP11.38□□□□□ -0.59
MSH5-204ENST00000375755 KDM8Q8N371 416 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 COMMD1Q8N668 190 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 OR13G1Q8NGZ3 307 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 MAFIPQ8WZ33 124 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 CCDC74BQ96LY2 380 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 KCNJ16Q9NPI9 418 aa11.38□□□□□ -0.59
MSH5-204ENST00000375755 FAM212BQ9NTI7 297 aaPredicted RBP11.38□□□□□ -0.59
MSH5-204ENST00000375755 PUS1Q9Y606 427 aaKnown RBP eCLIP11.38□□□□□ -0.59
MSH5-204ENST00000375755 MED19A0JLT2 244 aaPredicted RBP11.37□□□□□ -0.59
MSH5-204ENST00000375755 BLACEA4D250 179 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 MASP2O00187 686 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 TAS2R60P59551 318 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 SURF2Q15527 256 aaPredicted RBP11.37□□□□□ -0.59
MSH5-204ENST00000375755 PDZD11Q5EBL8 140 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 GFI1BQ5VTD9 330 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 OPN5Q6U736 354 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 HIST2H3AQ71DI3 136 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 WDR5BQ86VZ2 330 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 OR52N5Q8NH56 324 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 STT3BQ8TCJ2 826 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 CPNE4Q96A23 557 aaPredicted RBP11.37□□□□□ -0.59
MSH5-204ENST00000375755 MUCL1Q96DR8 90 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 CCNL2Q96S94 520 aaPredicted RBP11.37□□□□□ -0.59
MSH5-204ENST00000375755 SSX3Q99909 188 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 SUCNR1Q9BXA5 334 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 SLC35B3Q9H1N7 401 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 PRODH2Q9UF12 536 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 ZDHHC8Q9ULC8 765 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 A0A1B0GV50 99 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 BPNT1O95861 308 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 DANCRP0C864 163 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
MSH5-204ENST00000375755 ACKR1Q16570 336 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 PLAC9Q5JTB6 97 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 C1orf210Q8IVY1 113 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 ZNF440Q8IYI8 595 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 UBAC2Q8NBM4 344 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 METTL21AQ8WXB1 218 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 MMACHCQ9Y4U1 282 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 RAMP1O60894 148 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 DDTP30046 118 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 GNALP38405 381 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 CAMLGP49069 296 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 EMP2P54851 167 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 RSU1Q15404 277 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSH5-204ENST00000375755 IAH1Q2TAA2 248 aaPredicted RBP11.37□□□□□ -0.59
MSH5-204ENST00000375755 FNDC7Q5VTL7 733 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 AADACL3Q5VUY0 350 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 RPUSD3Q6P087 351 aaKnown RBP11.37□□□□□ -0.59
MSH5-204ENST00000375755 BEND4Q6ZU67 534 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 TMEM105Q8N8V8 129 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 NTNG2Q96CW9 530 aa11.37□□□□□ -0.59
MSH5-204ENST00000375755 SDCBPO00560 298 aaPredicted RBP11.36□□□□□ -0.59
MSH5-204ENST00000375755 SOCS1O15524 211 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 RAD51DO75771 328 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 ISG15P05161 165 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 NR2C1P13056 603 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 HPGDP15428 266 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 ZNF84P51523 738 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 PCK2Q16822 640 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 ZNF343Q6P1L6 599 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 MVB12AQ96EY5 273 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 GALNT14Q96FL9 552 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms