RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 VMA21Q3ZAQ7 101 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 ADAMTS17Q8TE56 1095 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 GLYATL2Q8WU03 294 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 SGK3Q96BR1 496 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 MEIKINA0A087WXM9 373 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 TMEM200CA6NKL6 621 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 ADAM11O75078 769 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 SLC22A5O76082 557 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 PTGDSP41222 190 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF121P58317 390 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 DSCR9P59020 149 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 FNDC9Q8TBE3 224 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 LGALS14Q8TCE9 139 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 CACNG6Q9BXT2 260 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 SLC25A31Q9H0C2 315 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 PLEKHF2Q9H8W4 249 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 FBXO7Q9Y3I1 522 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 SMAD9O15198 467 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 RPS16P62249 146 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 PLA2G7Q13093 441 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 DYRK1AQ13627 763 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 OR2AK2Q8NG84 335 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF552Q9H707 407 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF275Q9NSD4 429 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 ST6GALNAC2Q9UJ37 374 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 MPC1Q9Y5U8 109 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 IGKV3D-15A0A087WSY6 115 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 TMEM30CPA0ZSE6 113 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 HPGDSO60760 199 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 FUT4P22083 530 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 ARL3P36405 182 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 PLA2G5P39877 138 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 MDH2P40926 338 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 FOXL2P58012 376 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 RPL11P62913 178 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 P2RY14Q15391 338 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 NXF2Q9GZY0 626 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 CA10Q9NS85 328 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 C17orf112F2Z3M2 114 aa7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 BET1O15155 118 aa7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 NEURL1O76050 574 aa7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 RAB6AP20340 208 aa7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 CCBE1Q6UXH8 406 aaPredicted RBP7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 MOB3BQ86TA1 216 aa7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 MRPL13Q9BYD1 178 aaKnown RBP7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 RBFOX1Q9NWB1 397 aaKnown RBP7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 RNF7Q9UBF6 113 aa7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 ALG5Q9Y673 324 aa7.52□□□□□ -1.2
PDLIM5-201ENST00000317968 CCNKO75909 580 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 RAB7AP51149 207 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 ASAH1Q13510 395 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 RPUSD3Q6P087 351 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 MOB1BQ7L9L4 216 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 TUSC5Q8IXB3 177 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 SLC25A40Q8TBP6 338 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 RAB18Q9NP72 206 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 TRBV5-5A0A0J9YX44 114 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 A1L4Q6 167 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 OR5B21A6NL26 309 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 MSTNO14793 375 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 RAB3DO95716 219 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF32P17041 273 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 ATF1P18846 271 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 MST1P26927 711 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 GNB1P62873 340 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF362Q5T0B9 420 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 CCDC144NLQ6NUI1 221 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 UNQ9370/PRO34162Q6UXP9 181 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 MDS2Q8NDY4 140 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 OR51E1Q8TCB6 317 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 LRP4O75096 1905 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 B8ZZF3 427 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 C1orf162Q8NEQ5 155 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 OR2AE1Q8NHA4 323 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 ASCL3Q9NQ33 180 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 EHFQ9NZC4 300 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 KIF25Q9UIL4 384 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 LAMP3Q9UQV4 416 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 CACNG2Q9Y698 323 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 TMEM131Q92545 1883 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 NCBP2LA6PVI3 153 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 SIRPB1O00241 398 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 HS3ST1O14792 307 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 ADAM20O43506 726 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 CDC14BO60729 498 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 IFNA4P05014 189 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 CLDN6P56747 220 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 PNLIPRP3Q17RR3 467 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 GLYATL3Q5SZD4 288 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 GLCCI1Q86VQ1 547 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF418Q8TF45 676 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 CISD1Q9NZ45 108 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF107Q9UII5 783 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 CACNA1CQ13936 2221 aa7.52□□□□□ -1.21
PDLIM5-201ENST00000317968 A0A0B4J203 849 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 CLEC2LP0C7M8 214 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 TRAPPC2P0DI81 140 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 TRAPPC2BP0DI82 140 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 CD34P28906 385 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 CLDN20P56880 219 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms