RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 LHFPL2Q6ZUX7 228 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 LYPD6Q86Y78 171 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 NKAIN3Q8N8D7 197 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 NDNFQ8TB73 568 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 RFT1Q96AA3 541 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 SORCS2Q96PQ0 1159 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 BCL7BQ9BQE9 202 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 C14orf119Q9NWQ9 140 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 NKIRAS2Q9NYR9 191 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 MEGF11A6BM72 1044 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 MAGEB3O15480 346 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 CDRT1O95170 752 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 PTBP3O95758 552 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 GRPP07492 148 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 ERCC1P07992 297 aaPredicted RBP13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 RBMXP38159 391 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 MTCP1P56278 107 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 HNRNPA0Q13151 305 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 DCTN2Q13561 401 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 PCGF3Q3KNV8 242 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 ANGPTL5Q86XS5 388 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 CALHM1Q8IU99 346 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 CELF2-AS1Q8N7Q2 184 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 C12orf43Q96C57 262 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 OR51I2Q9H344 312 aa13.38□□□□□ -0.27
CCDC90B-201ENST00000260054 LRP5LA4QPB2 252 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 TMEM210A6NLX4 147 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 NOL3O60936 208 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 HPXP02790 462 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 RAB3BP20337 219 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 ZNF93P35789 620 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 RPS19P39019 145 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 HAAOP46952 286 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 SERPINB10P48595 397 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 SRP9P49458 86 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 ATP1B3P54709 279 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 CAV3P56539 151 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 MZT1Q08AG7 82 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 SPCS2Q15005 226 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 TPRA1Q86W33 373 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 C11orf53Q8IXP5 236 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 JAGN1Q8N5M9 183 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 OR5D18Q8NGL1 313 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 METTL17Q9H7H0 456 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 SAP30LQ9HAJ7 183 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 NEK6Q9HC98 313 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 DECR2Q9NUI1 292 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 UFSP2Q9NUQ7 469 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 RSL24D1Q9UHA3 163 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 UNC79Q9P2D8 2635 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 APCP25054 2843 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 A0A0G2JK05 382 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 PDCD5O14737 125 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 SLC22A1O15245 554 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 TPD52L2O43399 206 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 NDUFS7O75251 213 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 CD37P11049 281 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 GATA4P43694 442 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 TESK1Q15569 626 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 HAGHLQ6PII5 290 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 ZNF573Q86YE8 665 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 SCCPDHQ8NBX0 429 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 RAB1BQ9H0U4 201 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 TLNRD1Q9H1K6 362 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 V9GY05 133 aa13.37□□□□□ -0.27
CCDC90B-201ENST00000260054 CHD3Q12873 2000 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 CDIPTO14735 213 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 LY6HO94772 140 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 PLATP00750 562 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 IL1AP01583 271 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 OR3A4PP47883 348 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 ZP1P60852 638 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 GLT8D1Q68CQ7 371 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 ZNF826PQ6ZT77 177 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 USP43Q70EL4 1123 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 MOGAT3Q86VF5 341 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 TGIF2LYQ8IUE0 185 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 CROCCP3Q8IVE0 287 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 CDH26Q8IXH8 852 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 GPER1Q99527 375 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 EGLN1Q9GZT9 426 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 DCSTAMPQ9H295 470 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 CNTD2Q9H8S5 307 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 GCM1Q9NP62 436 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 PLEKHA6Q9Y2H5 1048 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 CSMD2Q7Z408 3487 aa13.36□□□□□ -0.27
CCDC90B-201ENST00000260054 POLQO75417 2590 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 TRIM64BA6NI03 449 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 A6NLC8 198 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 ZNF701M0R085 212 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 SPRY1O43609 319 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 SYNGR1O43759 233 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 RHBDL1O75783 438 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 TNFRSF1AP19438 455 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 PMELP40967 661 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 POU3F4P49335 361 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 OR4D6Q8NGJ1 314 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 AQP3Q92482 292 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 TREM2Q9NZC2 230 aa13.35□□□□□ -0.27
CCDC90B-201ENST00000260054 CACNG2Q9Y698 323 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms