RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ZNF845Q96IR2 970 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 SEC22AQ96IW7 307 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 RTBDNQ9BSG5 229 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 LINC00470Q9BZP3 86 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 METTL9Q9H1A3 318 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 ZNF703Q9H7S9 590 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 ATPIF1Q9UII2 106 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 HSF4Q9ULV5 492 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 MFSD2BA6NFX1 497 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 RRP8O43159 456 aaKnown RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 SFT2D2O95562 160 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 CRYZL1O95825 349 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 ZNF250P15622 560 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 HTR5AP47898 357 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 CYCSP99999 105 aaKnown RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 RSPO4Q2I0M5 234 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 SKA3Q8IX90 412 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 CASTOR1Q8WTX7 329 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 ABHD3Q8WU67 409 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 CYYR1Q96J86 154 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 ST6GALNAC5Q9BVH7 336 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 NMES1Q9C002 83 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 TRBV6-7A0A0A0MS04 114 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 RNF222A6NCQ9 220 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 FIGNL2A6NMB9 653 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 CDX4O14627 284 aaPredicted RBP14.07□□□□□ -0.16
UBE3D-201ENST00000237186 DLSTP36957 453 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 NPY4RP50391 375 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 LHX2P50458 406 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 ATP1B3P54709 279 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 CCDC157Q569K6 752 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 ABHD17BQ5VST6 288 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 PLXDC2Q6UX71 529 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 LHFPL2Q6ZUX7 228 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 KCTD9Q7L273 389 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 CSNK2A3Q8NEV1 391 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 AKR7LQ8NHP1 331 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 FGFBP3Q8TAT2 258 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 ADAMTS17Q8TE56 1095 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 PPA2Q9H2U2 334 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 RAB18Q9NP72 206 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 EDARQ9UNE0 448 aa14.07□□□□□ -0.16
UBE3D-201ENST00000237186 IGKV1-27A0A075B6S5 117 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 hCG_38984A0A1B0GV85 526 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 RPL36A-HNRNPH2H7BZ11 118 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 CRHP06850 196 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 PATE4P0C8F1 98 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 TMEM225BP0DP42 221 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 M6PRP20645 277 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 RBP2P50120 134 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 FAM3AP98173 230 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 OR8B8Q15620 311 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 COQ8AQ8NI60 647 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 THAP6Q8TBB0 222 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 ST8SIA2Q92186 375 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 SPSB4Q96A44 273 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 MRPS24Q96EL2 167 aaKnown RBP14.06□□□□□ -0.16
UBE3D-201ENST00000237186 CDC6Q99741 560 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 SLC25A32Q9H2D1 315 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 SDHAF2Q9NX18 166 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 ABI3Q9P2A4 366 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 B4GALT7Q9UBV7 327 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 BCL2L11O43521 198 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
UBE3D-201ENST00000237186 FARS2O95363 451 aaKnown RBP14.06□□□□□ -0.16
UBE3D-201ENST00000237186 PSMB6P28072 239 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 ECI1P42126 302 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 CLDN18P56856 261 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 SUPT4H1P63272 117 aaKnown RBP14.06□□□□□ -0.16
UBE3D-201ENST00000237186 DCAF10Q5QP82 559 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 TSPO2Q5TGU0 170 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 SIGIRRQ6IA17 410 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 RPUSD3Q6P087 351 aaKnown RBP14.06□□□□□ -0.16
UBE3D-201ENST00000237186 CLEC18BQ6UXF7 455 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 COLCA1Q6ZS62 124 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 PDZD9Q8IXQ8 264 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 EMG1Q92979 244 aaKnown RBP14.06□□□□□ -0.16
UBE3D-201ENST00000237186 BORCS8Q96FH0 119 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 TECTBQ96PL2 329 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 SIGLEC12Q96PQ1 595 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 C1QTNF5Q9BXJ0 243 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 PRDM14Q9GZV8 571 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 ELL3Q9HB65 397 aaPredicted RBP14.06□□□□□ -0.16
UBE3D-201ENST00000237186 DECR2Q9NUI1 292 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 PLEKHJ1Q9NW61 149 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 PARPBPQ9NWS1 579 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 IL36GQ9NZH8 169 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 NUP50Q9UKX7 468 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 MCTS1Q9ULC4 181 aaKnown RBP14.06□□□□□ -0.16
UBE3D-201ENST00000237186 KCNMB2Q9Y691 235 aa14.06□□□□□ -0.16
UBE3D-201ENST00000237186 KANTRA0A1W2PQU2 76 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 FAM25EA8MYX2 175 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 XRCC2O43543 280 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 MRPL33O75394 65 aaKnown RBP14.05□□□□□ -0.16
UBE3D-201ENST00000237186 SPDEFO95238 335 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 MT-CO3P00414 261 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 F10P00742 488 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 NRASP01111 189 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 RPS2P15880 293 aaKnown RBP14.05□□□□□ -0.16
UBE3D-201ENST00000237186 SERPINF1P36955 418 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms