RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 CD37P11049 281 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 TNFRSF1AP19438 455 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 AZGP1P25311 298 aaKnown RBP10.45□□□□□ -0.74
LINC00339-213ENST00000642137 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
LINC00339-213ENST00000642137 THBS2P35442 1172 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 GATA4P43694 442 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 RBP2P50120 134 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 PSMD7P51665 324 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 ATP1B3P54709 279 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 TMBIM6P55061 237 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 TNFAIP6P98066 277 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-213ENST00000642137 TESK1Q15569 626 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 SLC16A12Q6ZSM3 486 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 LHFPL2Q6ZUX7 228 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 LRRTM1Q86UE6 522 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 TPRA1Q86W33 373 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 CLVS1Q8IUQ0 354 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-213ENST00000642137 OR10AD1Q8NGE0 317 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 RPL3LQ92901 407 aaKnown RBP10.45□□□□□ -0.74
LINC00339-213ENST00000642137 DVL3Q92997 716 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-213ENST00000642137 ERGIC1Q969X5 290 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 BORCS8Q96FH0 119 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 MEGF10Q96KG7 1140 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 CCL19Q99731 98 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 BCL7BQ9BQE9 202 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 CENPOQ9BU64 300 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 FGF23Q9GZV9 251 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-213ENST00000642137 LIME1Q9H400 295 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 CXorf56Q9H5V9 222 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 DECR2Q9NUI1 292 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 NDUFA13Q9P0J0 144 aa10.45□□□□□ -0.74
LINC00339-213ENST00000642137 FAM230AA0A1W2PPH8 454 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 TRIM64BA6NI03 449 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 PDCD5O14737 125 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 GABARAPO95166 117 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 HCKP08631 526 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 PAX1P15863 534 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 MYL9P24844 172 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 MTNR1BP49286 362 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 GPM6AP51674 278 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 CCL8P80075 99 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 DMRTC1Q5HYR2 192 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 GLT8D1Q68CQ7 371 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 ZNF573Q86YE8 665 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 OR52N4Q8NGI2 321 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 OR51A2Q8NGJ7 313 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 ITLN1Q8WWA0 313 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 FOXRED1Q96CU9 486 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-213ENST00000642137 CPNE2Q96FN4 548 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-213ENST00000642137 OR2V2Q96R30 315 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 NAA50Q9GZZ1 169 aaKnown RBP10.44□□□□□ -0.74
LINC00339-213ENST00000642137 TLNRD1Q9H1K6 362 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 OR51I2Q9H344 312 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 TPK1Q9H3S4 243 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 RNF167Q9H6Y7 350 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 CEPT1Q9Y6K0 416 aa10.44□□□□□ -0.74
LINC00339-213ENST00000642137 GCN1Q92616 2671 aaKnown RBP10.43□□□□□ -0.74
LINC00339-213ENST00000642137 CHD3Q12873 2000 aaKnown RBP10.43□□□□□ -0.74
LINC00339-213ENST00000642137 COL12A1Q99715 3063 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 LRP5LA4QPB2 252 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 F12P00748 615 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-213ENST00000642137 GRPP07492 148 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 ADRA2CP18825 462 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 CDKN1AP38936 164 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 MTCP1P56278 107 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 LSM3P62310 102 aaKnown RBP10.43□□□□□ -0.74
LINC00339-213ENST00000642137 KISS1Q15726 138 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 CTF1Q16619 201 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 LYPD6Q86Y78 171 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 C11orf53Q8IXP5 236 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 NKAIN3Q8N8D7 197 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 ZNF420Q8TAQ5 688 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-213ENST00000642137 TRMT10AQ8TBZ6 339 aaKnown RBP10.43□□□□□ -0.74
LINC00339-213ENST00000642137 NPRL2Q8WTW4 380 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 RAB2BQ8WUD1 216 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 SORCS2Q96PQ0 1159 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 SAP30LQ9HAJ7 183 aa10.43□□□□□ -0.74
LINC00339-213ENST00000642137 ZNF701Q9NV72 531 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-213ENST00000642137 IGKV1-27A0A075B6S5 117 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 SMIM31A0A1B0GVY4 71 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 SHISA3A0PJX4 238 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 DPPA5A6NC42 116 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 IFNL4K9M1U5 179 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 TPD52L2O43399 206 aaKnown RBP10.42□□□□□ -0.74
LINC00339-213ENST00000642137 HPXP02790 462 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 ACAA1P09110 424 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-213ENST00000642137 RAB3BP20337 219 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 DNASE1P24855 282 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 SDC2P34741 201 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 ZNF93P35789 620 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-213ENST00000642137 CFHR2P36980 270 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 RANBP1P43487 201 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 HAAOP46952 286 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 EFNA4P52798 201 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 VBP1P61758 197 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 MRPS11P82912 194 aaKnown RBP10.42□□□□□ -0.74
LINC00339-213ENST00000642137 ZNF154Q13106 437 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 ZNF181Q2M3W8 571 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 SPRNQ5BIV9 151 aa10.42□□□□□ -0.74
LINC00339-213ENST00000642137 DDI2Q5TDH0 399 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms