RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 IGKV1-9A0A0C4DH69 117 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 CLDN25C9JDP6 229 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 TMEM178BH3BS89 294 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 H7C1Q1 480 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 CDIPTO14735 213 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 WNT9BO14905 357 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 MRPS14O60783 128 aaKnown RBP11.12□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF205O95201 554 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 OCM2P0CE71 109 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 SLC25A16P16260 332 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 PCMT1P22061 227 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 NR4A2P43354 598 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 TMEM33P57088 247 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 KCTD21Q4G0X4 260 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 FAM201AQ5SY85 155 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 LIPKQ5VXJ0 399 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF773Q6PK81 442 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 SVOPQ8N4V2 548 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 OR5A2Q8NGI9 324 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 OR13C9Q8NGT0 318 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 Q8TCH9 128 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 PP6455Q8WZ26 134 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
GTF3A-209ENST00000640289 MGLLQ99685 303 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 REG4Q9BYZ8 158 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 NARFLQ9H6Q4 476 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 METTL17Q9H7H0 456 aaPredicted RBP11.12□□□□□ -0.63
GTF3A-209ENST00000640289 FN3KRPQ9HA64 309 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 WIPI2Q9Y4P8 454 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 VPS13CQ709C8 3753 aa11.12□□□□□ -0.63
GTF3A-209ENST00000640289 IGHV4-61A0A0C4DH41 118 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 TRBV5-5A0A0J9YX44 114 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 FAM230AA0A1W2PPH8 454 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 hCG_1807616A0A1W2PRN6 198 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 PQLC2LA1A4F0 135 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 TMEM210A6NLX4 147 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 SMAD7O15105 426 aaKnown RBP11.11□□□□□ -0.63
GTF3A-209ENST00000640289 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
GTF3A-209ENST00000640289 SERPINA3P01011 423 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 CD1AP06126 327 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 RPSAP08865 295 aaKnown RBP11.11□□□□□ -0.63
GTF3A-209ENST00000640289 ATF1P18846 271 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 GNG3P63215 75 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 MLLT11Q13015 90 aaPredicted RBP11.11□□□□□ -0.63
GTF3A-209ENST00000640289 INSL4Q14641 139 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 YIF1BQ5BJH7 314 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 FAM76BQ5HYJ3 339 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF367Q7RTV3 350 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 PARP16Q8N5Y8 322 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 BOLLQ8N9W6 283 aaKnown RBP11.11□□□□□ -0.63
GTF3A-209ENST00000640289 SCCPDHQ8NBX0 429 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 C19orf18Q8NEA5 215 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 OR11L1Q8NGX0 322 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 UFD1Q92890 307 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 ERGIC1Q969X5 290 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 TMEM106AQ96A25 262 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 OR14A2Q96R54 314 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 TMED9Q9BVK6 235 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 TLNRD1Q9H1K6 362 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 OR51I2Q9H344 312 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 ISYNA1Q9NPH2 558 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 TAS2R4Q9NYW5 299 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 RNF7Q9UBF6 113 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 NPTNQ9Y639 398 aa11.11□□□□□ -0.63
GTF3A-209ENST00000640289 ARID1AO14497 2285 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 IGKV1-27A0A075B6S5 117 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 A0A1W2PPK0 400 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 LRP5LA4QPB2 252 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 OR5B21A6NL26 309 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 RHBDL1O75783 438 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 TNFAIP8O95379 198 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 EGR1P18146 543 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 AZGP1P25311 298 aaKnown RBP11.1□□□□□ -0.63
GTF3A-209ENST00000640289 HAAOP46952 286 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 TPBGQ13641 420 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 ZMYND11Q15326 602 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 CNN3Q15417 329 aaKnown RBP11.1□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF181Q2M3W8 571 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 Q499Y3 187 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 ARMCX4Q5H9R4 360 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 UBE2UQ5VVX9 321 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 HAGHLQ6PII5 290 aaPredicted RBP11.1□□□□□ -0.63
GTF3A-209ENST00000640289 WDR82Q6UXN9 313 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 UTS2BQ765I0 119 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 RNF144BQ7Z419 303 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 SERPINA12Q8IW75 414 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 GCSAMQ8N6F7 178 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 LRRC29Q8WV35 223 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 RAB1CQ92928 201 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 TIMD4Q96H15 378 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 ZCCHC4Q9H5U6 513 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 SLC7A11Q9UPY5 501 aa11.1□□□□□ -0.63
GTF3A-209ENST00000640289 ISPDA4D126 451 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 LRRC30A6NM36 301 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 IFNL4K9M1U5 179 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 CD2P06729 351 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 IRF2P14316 349 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms